RNA–Protein interactions for RNA: ENST00000398460.3

MEG3-201, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 3,382 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-201ENST00000398460 CTR9Q6PD62 1173 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 FOXR1Q6PIV2 292 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 CLEC4GQ6UXB4 293 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 FERMT2Q96AC1 680 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 TSPYL1Q9H0U9 437 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 KCNJ6P48051 423 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 MDM2Q00987 491 aaPredicted RBP13.78□□□□□ -0.2
MEG3-201ENST00000398460 SLC20A2Q08357 652 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 EARS2Q5JPH6 523 aaKnown RBP13.78□□□□□ -0.2
MEG3-201ENST00000398460 ARFGAP3Q9NP61 516 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
MEG3-201ENST00000398460 ANAPC4Q9UJX5 808 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 PPP2R2CQ9Y2T4 447 aa13.78□□□□□ -0.2
MEG3-201ENST00000398460 SHANK3Q9BYB0 1731 aa13.77□□□□□ -0.2
MEG3-201ENST00000398460 SYNRGQ9UMZ2 1314 aa13.77□□□□□ -0.2
MEG3-201ENST00000398460 ACTN4O43707 911 aaKnown RBP13.77□□□□□ -0.2
MEG3-201ENST00000398460 PRDX5P30044 214 aa13.77□□□□□ -0.2
MEG3-201ENST00000398460 CASQ1P31415 396 aa13.77□□□□□ -0.2
MEG3-201ENST00000398460 CC2D1AQ6P1N0 951 aaPredicted RBP13.77□□□□□ -0.2
MEG3-201ENST00000398460 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.2
MEG3-201ENST00000398460 WDR24Q96S15 920 aa13.77□□□□□ -0.2
MEG3-201ENST00000398460 PARD6BQ9BYG5 372 aa13.77□□□□□ -0.2
MEG3-201ENST00000398460 KAT14Q9H8E8 782 aa13.77□□□□□ -0.2
MEG3-201ENST00000398460 TADA3O75528 432 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 KLRK1P26718 216 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 TXLNAP40222 546 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 GTF2A1P52655 376 aaPredicted RBP13.77□□□□□ -0.21
MEG3-201ENST00000398460 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
MEG3-201ENST00000398460 ANKRD20A12PQ8NF67 263 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 DESI2Q9BSY9 194 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 IRX2Q9BZI1 471 aaPredicted RBP13.77□□□□□ -0.21
MEG3-201ENST00000398460 BLZF1Q9H2G9 400 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 MKNK2Q9HBH9 465 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 KCND1Q9NSA2 647 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 THRAP3Q9Y2W1 955 aaKnown RBP13.77□□□□□ -0.21
MEG3-201ENST00000398460 DDAH1O94760 285 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 CYP2D6P10635 497 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 KIF5BP33176 963 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 PKN1Q16512 942 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 TMTC3Q6ZXV5 915 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 PHF20Q9BVI0 1012 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 SUGCTQ9HAC7 445 aa13.77□□□□□ -0.21
MEG3-201ENST00000398460 RRP15Q9Y3B9 282 aaKnown RBP13.77□□□□□ -0.21
MEG3-201ENST00000398460 MYO5AQ9Y4I1 1855 aaKnown RBP13.76□□□□□ -0.21
MEG3-201ENST00000398460 ZNF804BA4D1E1 1349 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 H3BQF6 201 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 TROAPQ12815 778 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 SF3B3Q15393 1217 aaKnown RBP13.76□□□□□ -0.21
MEG3-201ENST00000398460 RRAGBQ5VZM2 374 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 IQUBQ8NA54 791 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 PAGE5Q96GU1 130 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 GOLGA6L9A6NEM1 432 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 COBLO75128 1261 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 ERCC5P28715 1186 aaPredicted RBP13.76□□□□□ -0.21
MEG3-201ENST00000398460 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
MEG3-201ENST00000398460 TBC1D9BQ66K14 1250 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 GPATCH11Q8N954 259 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 IGSF22Q8N9C0 903 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 NUP98P52948 1817 aa13.76□□□□□ -0.21
MEG3-201ENST00000398460 AKR1B15C9JRZ8 316 aaPredicted RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 N4BP1O75113 896 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 PCP11498 1178 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 SCG2P13521 617 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 TRIM65Q6PJ69 517 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 REXO1L1PQ8IX06 675 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 ELOA2Q8IYF1 753 aaPredicted RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 NSUN4Q96CB9 384 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 DRC1Q96MC2 740 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 NYXQ9GZU5 481 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 DCP1AQ9NPI6 582 aaPredicted RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 INTS13Q9NVM9 706 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 BAZ2BQ9UIF8 2168 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 STX10O60499 249 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 CCT6AP40227 531 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 EVX2Q03828 476 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 SRBD1Q8N5C6 995 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 PDE11AQ9HCR9 933 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 PARP3Q9Y6F1 533 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 MYH3P11055 1940 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 ITGB4P16144 1822 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 GNPATO15228 680 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 TFRCP02786 760 aaKnown RBP13.75□□□□□ -0.21
MEG3-201ENST00000398460 PPP2R3AQ06190 1150 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 SPATA1Q5VX52 437 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 TPTE2Q6XPS3 522 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 LINC00116Q8NCU8 138 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 STX8Q9UNK0 236 aa13.75□□□□□ -0.21
MEG3-201ENST00000398460 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
MEG3-201ENST00000398460 LOC102724159A0A0B4J2E5 919 aa13.74□□□□□ -0.21
MEG3-201ENST00000398460 CCDC194A0A1B0GVG4 234 aa13.74□□□□□ -0.21
MEG3-201ENST00000398460 N4BP3O15049 544 aa13.74□□□□□ -0.21
MEG3-201ENST00000398460 SARSP49591 514 aaKnown RBP13.74□□□□□ -0.21
MEG3-201ENST00000398460 TFAP4Q01664 338 aa13.74□□□□□ -0.21
MEG3-201ENST00000398460 PWP2Q15269 919 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms