RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PRDM1O75626 825 aa19.9■□□□□ 0.78
APTR-201ENST00000398043 FMNL1O95466 1100 aaPredicted RBP19.9■□□□□ 0.78
APTR-201ENST00000398043 FGAP02671 866 aa19.9■□□□□ 0.78
APTR-201ENST00000398043 FGRP09769 529 aa19.9■□□□□ 0.78
APTR-201ENST00000398043 RPAP3Q9H6T3 665 aaPredicted RBP19.9■□□□□ 0.78
APTR-201ENST00000398043 MKNK2Q9HBH9 465 aa19.9■□□□□ 0.78
APTR-201ENST00000398043 GABRQQ9UN88 632 aa19.9■□□□□ 0.78
APTR-201ENST00000398043 CNMDO75829 334 aa19.89■□□□□ 0.77
APTR-201ENST00000398043 HOXD10P28358 340 aa19.89■□□□□ 0.77
APTR-201ENST00000398043 PRKCZQ05513 592 aa19.89■□□□□ 0.77
APTR-201ENST00000398043 Q3C1V9 767 aa19.89■□□□□ 0.77
APTR-201ENST00000398043 MYPNQ86TC9 1320 aa19.89■□□□□ 0.77
APTR-201ENST00000398043 GTF3C2Q8WUA4 911 aaPredicted RBP19.89■□□□□ 0.77
APTR-201ENST00000398043 LPAR1Q92633 364 aa19.89■□□□□ 0.77
APTR-201ENST00000398043 ZNF287Q9HBT7 754 aa19.89■□□□□ 0.77
APTR-201ENST00000398043 NYAP2Q9P242 653 aa19.89■□□□□ 0.77
APTR-201ENST00000398043 SPDYE16A6NNV3 312 aaPredicted RBP19.88■□□□□ 0.77
APTR-201ENST00000398043 CTDSPL2Q05D32 466 aa19.88■□□□□ 0.77
APTR-201ENST00000398043 CWC27Q6UX04 472 aaKnown RBP19.88■□□□□ 0.77
APTR-201ENST00000398043 NEDD1Q8NHV4 660 aa19.88■□□□□ 0.77
APTR-201ENST00000398043 ZNF333Q96JL9 665 aa19.88■□□□□ 0.77
APTR-201ENST00000398043 IL25Q9H293 177 aa19.88■□□□□ 0.77
APTR-201ENST00000398043 SH2D4AQ9H788 454 aa19.88■□□□□ 0.77
APTR-201ENST00000398043 INCENPQ9NQS7 918 aa19.88■□□□□ 0.77
APTR-201ENST00000398043 HIP1O00291 1037 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 ERVK-9P63128 1117 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 ERVK-24P63145 666 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 PDE4BQ07343 736 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 ZNF444Q8N0Y2 327 aaPredicted RBP19.87■□□□□ 0.77
APTR-201ENST00000398043 GPRC5AQ8NFJ5 357 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 NBPF3Q9H094 633 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 GJD2Q9UKL4 321 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 RABGAP1Q9Y3P9 1069 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 BRCA2P51587 3418 aa19.87■□□□□ 0.77
APTR-201ENST00000398043 TNPO2O14787 897 aaKnown RBP19.86■□□□□ 0.77
APTR-201ENST00000398043 ORC4O43929 436 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 SLC3A2P08195 630 aaKnown RBP19.86■□□□□ 0.77
APTR-201ENST00000398043 SOX10P56693 466 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 IRF5Q13568 498 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 COG2Q14746 738 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 SLC9C1Q4G0N8 1177 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 SPICE1Q8N0Z3 855 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 MKL1Q969V6 931 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 CEP95Q96GE4 821 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 DIAPH3Q9NSV4 1193 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 MTMR4Q9NYA4 1195 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 BTBD7Q9P203 1132 aa19.86■□□□□ 0.77
APTR-201ENST00000398043 WDR46O15213 610 aaKnown RBP19.85■□□□□ 0.77
APTR-201ENST00000398043 FLT3LGP49771 235 aa19.85■□□□□ 0.77
APTR-201ENST00000398043 MFAP1P55081 439 aaKnown RBP19.85■□□□□ 0.77
APTR-201ENST00000398043 SH3TC2Q8TF17 1288 aa19.85■□□□□ 0.77
APTR-201ENST00000398043 PORCNQ9H237 461 aa19.85■□□□□ 0.77
APTR-201ENST00000398043 NOVP48745 357 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 TFAP4Q01664 338 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 FAM47AQ5JRC9 791 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 CENPQQ7L2Z9 268 aaPredicted RBP19.84■□□□□ 0.77
APTR-201ENST00000398043 COA7Q96BR5 231 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 PAGR1Q9BTK6 254 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 GOPCQ9HD26 462 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 IL17RBQ9NRM6 502 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 HOXC10Q9NYD6 342 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 SYNPO2Q9UMS6 1093 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 ADAMTS5Q9UNA0 930 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 TNRC18O15417 2968 aaPredicted RBP19.84■□□□□ 0.77
APTR-201ENST00000398043 PDE4DIPQ5VU43 2346 aa19.84■□□□□ 0.77
APTR-201ENST00000398043 ZNF236Q9UL36 1845 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 GRK4P32298 578 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 DSG3P32926 999 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 ATP2B2Q01814 1243 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 NKX2-3Q8TAU0 364 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 RAET1EQ8TD07 263 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 DSCC1Q9BVC3 393 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 TANGO6Q9C0B7 1094 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 CLIP2Q9UDT6 1046 aa19.83■□□□□ 0.77
APTR-201ENST00000398043 SMCHD1A6NHR9 2005 aa19.83■□□□□ 0.76
APTR-201ENST00000398043 F5H6K3 240 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 TTLL1O95922 423 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 TSPY3P0CV98 308 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 TSPY8P0CW00 308 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 CHMLP26374 656 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 KLRC3Q07444 240 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 NBPF11Q86T75 865 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 PXYLP1Q8TE99 480 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 USP6NLQ92738 828 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 PLXNA1Q9UIW2 1896 aa19.82■□□□□ 0.76
APTR-201ENST00000398043 POTEFA5A3E0 1075 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 NDUFB10O96000 172 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 MAPK4P31152 587 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 HAND2P61296 217 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 TBC1D10CQ8IV04 446 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 SLAIN1Q8ND83 568 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 GMCL1P1Q8NEA9 526 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 STAG1Q8WVM7 1258 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 FBXO28Q9NVF7 368 aa19.81■□□□□ 0.76
APTR-201ENST00000398043 RAD50Q92878 1312 aa19.8■□□□□ 0.76
APTR-201ENST00000398043 ADCY3O60266 1144 aa19.8■□□□□ 0.76
APTR-201ENST00000398043 NMT2O60551 498 aa19.8■□□□□ 0.76
APTR-201ENST00000398043 FLOT1O75955 427 aa19.8■□□□□ 0.76
APTR-201ENST00000398043 MORN1Q5T089 497 aa19.8■□□□□ 0.76
APTR-201ENST00000398043 FAM83BQ5T0W9 1011 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms