RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 NFIXQ14938 502 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 TTC38Q5R3I4 469 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 PIK3AP1Q6ZUJ8 805 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 KIF18AQ8NI77 898 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 DYNLL2Q96FJ2 89 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 SAMSN1Q9NSI8 373 aaKnown RBP20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 OGFRQ9NZT2 677 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 DLEC1Q9Y238 1755 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 NRDCO43847 1150 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 NLRP5P59047 1200 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 PTGDRQ13258 359 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 KANK3Q6NY19 840 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 SCG2P13521 617 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 DIXDC1Q155Q3 683 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 GRIK5Q16478 980 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 SBK1Q52WX2 424 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 SPATA20Q8TB22 786 aa20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ZNF215Q9UL58 517 aaPredicted RBP20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 V9GYY5 206 aaPredicted RBP20.9■□□□□ 0.94
CHRFAM7A-202ENST00000397827 IRS2Q9Y4H2 1338 aa20.89■□□□□ 0.94
CHRFAM7A-202ENST00000397827 BTAF1O14981 1849 aa20.89■□□□□ 0.94
CHRFAM7A-202ENST00000397827 TOM1O60784 492 aa20.89■□□□□ 0.93
CHRFAM7A-202ENST00000397827 STAMQ92783 540 aa20.89■□□□□ 0.93
CHRFAM7A-202ENST00000397827 PSDA5PKW4 1024 aaPredicted RBP20.89■□□□□ 0.93
CHRFAM7A-202ENST00000397827 ZNF18P17022 549 aa20.89■□□□□ 0.93
CHRFAM7A-202ENST00000397827 TFAP4Q01664 338 aa20.89■□□□□ 0.93
CHRFAM7A-202ENST00000397827 ENOX1Q8TC92 643 aaKnown RBP20.89■□□□□ 0.93
CHRFAM7A-202ENST00000397827 DACH1Q9UI36 760 aa20.89■□□□□ 0.93
CHRFAM7A-202ENST00000397827 RFC4P35249 363 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 USP5P45974 858 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 KLHL10Q6JEL2 608 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SYT10Q6XYQ8 523 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 TRIML1Q8N9V2 468 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SH3RF3Q8TEJ3 882 aaPredicted RBP20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 PAGE5Q96GU1 130 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 IL17RBQ9NRM6 502 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 COL24A1Q17RW2 1714 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 CCDC88AQ3V6T2 1871 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 GABPB1Q06547 395 aaPredicted RBP20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 MTMR7Q9Y216 660 aa20.88■□□□□ 0.93
CHRFAM7A-202ENST00000397827 EP400Q96L91 3159 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 MYO1BO43795 1136 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 LDHBP07195 334 aaKnown RBP20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SLFN14P0C7P3 912 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SMYD4Q8IYR2 804 aaPredicted RBP20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 FERMT2Q96AC1 680 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 KIAA1551Q9HCM1 1747 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 LAMB1P07942 1786 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 TNRC6CQ9HCJ0 1690 aaKnown RBP20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 MCM7P33993 719 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 STX17P56962 302 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 DHX8Q14562 1220 aaKnown RBP20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 PFKFB3Q16875 520 aaPredicted RBP20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 STAG2Q8N3U4 1231 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 ZFP91Q96JP5 570 aaPredicted RBP20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 TMX1Q9H3N1 280 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 KAT14Q9H8E8 782 aa20.87■□□□□ 0.93
CHRFAM7A-202ENST00000397827 CD44P16070 742 aaKnown RBP20.86■□□□□ 0.93
CHRFAM7A-202ENST00000397827 KCNJ6P48051 423 aa20.86■□□□□ 0.93
CHRFAM7A-202ENST00000397827 C12orf60Q5U649 245 aa20.86■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SPTY2D1Q68D10 685 aaPredicted RBP20.86■□□□□ 0.93
CHRFAM7A-202ENST00000397827 GPKOWQ92917 476 aaPredicted RBP eCLIP20.86■□□□□ 0.93
CHRFAM7A-202ENST00000397827 PLCD1P51178 756 aa20.86■□□□□ 0.93
CHRFAM7A-202ENST00000397827 ATP2C1P98194 919 aaPredicted RBP20.86■□□□□ 0.93
CHRFAM7A-202ENST00000397827 MKRN1Q9UHC7 482 aaKnown RBP20.86■□□□□ 0.93
CHRFAM7A-202ENST00000397827 CCDC66A2RUB6 948 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 USP17L3A6NCW0 530 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 USP17L4A6NCW7 530 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 USP17L1Q7RTZ2 530 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SH3RF1Q7Z6J0 888 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 HOMER1Q86YM7 354 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 CERS3Q8IU89 383 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SLC44A5Q8NCS7 719 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 KIF2AO00139 706 aaPredicted RBP20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 BMP15O95972 392 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 SYCP1Q15431 976 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 PNMA1Q8ND90 353 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 NOL10Q9BSC4 688 aaKnown RBP20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 MORC2Q9Y6X9 1032 aaPredicted RBP20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 ADKP55263 362 aaKnown RBP20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 IRX3P78415 501 aaPredicted RBP20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 GRAPQ13588 217 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 IL17AQ16552 155 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 TRAPPC3LQ5T215 181 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 GRAPLQ8TC17 118 aaPredicted RBP20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 RASGRP4Q8TDF6 673 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 TGFBRAP1Q8WUH2 860 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 MKNK2Q9HBH9 465 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 USP21Q9UK80 565 aa20.85■□□□□ 0.93
CHRFAM7A-202ENST00000397827 KIF5BP33176 963 aa20.84■□□□□ 0.93
CHRFAM7A-202ENST00000397827 FAM196AQ6ZSG2 479 aa20.84■□□□□ 0.93
CHRFAM7A-202ENST00000397827 CCDC34Q96HJ3 373 aa20.84■□□□□ 0.93
CHRFAM7A-202ENST00000397827 BLZF1Q9H2G9 400 aa20.84■□□□□ 0.93
CHRFAM7A-202ENST00000397827 DPYDQ12882 1025 aa20.84■□□□□ 0.93
CHRFAM7A-202ENST00000397827 TMEM139Q8IV31 216 aa20.84■□□□□ 0.93
CHRFAM7A-202ENST00000397827 WDR66Q8TBY9 1149 aa20.84■□□□□ 0.93
CHRFAM7A-202ENST00000397827 FAM205AQ6ZU69 1335 aa20.83■□□□□ 0.93
CHRFAM7A-202ENST00000397827 ERCC5P28715 1186 aaPredicted RBP20.83■□□□□ 0.93
CHRFAM7A-202ENST00000397827 CDC25AP30304 524 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms