RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 EPC1Q9H2F5 836 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 THRAP3Q9Y2W1 955 aaKnown RBP11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 BMP6P22004 513 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 DTHD1Q6ZMT9 781 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 IKBKBO14920 756 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 RPS6KA4O75676 772 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 TROAPQ12815 778 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 LRRC47Q8N1G4 583 aaKnown RBP11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 TRIM47Q96LD4 638 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 HPSEQ9Y251 543 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 CCNT1O60563 726 aaKnown RBP11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 LDHCP07864 332 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 PLCD1P51178 756 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 MTF1Q14872 753 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 SEC23AQ15436 765 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 SPECC1LQ69YQ0 1117 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 AMIGO3Q86WK7 504 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 BLIDQ8IZY5 108 aa11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 MAGEC2Q9UBF1 373 aaPredicted RBP11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 ARPP21Q9UBL0 812 aaPredicted RBP11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 BIN2Q9UBW5 565 aaPredicted RBP11.83□□□□□ -0.52
CPSF1P1-201ENST00000397477 COL18A1P39060 1754 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 BRIP1Q9BX63 1249 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 PUF60Q9UHX1 559 aaKnown RBP11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 TUBE1Q9UJT0 475 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 GDAQ9Y2T3 454 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 STK36Q9NRP7 1315 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 A0A087X0B3 334 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 KLRF2D3W0D1 207 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 CUL4BQ13620 913 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 PKN1Q16512 942 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 KIF4BQ2VIQ3 1234 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 WDR66Q8TBY9 1149 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 ZNF384Q8TF68 577 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 ZNF622Q969S3 477 aaKnown RBP eCLIP11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 EYA3Q99504 573 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 IRX2Q9BZI1 471 aaPredicted RBP11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 ATP8A2Q9NTI2 1148 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 TXKP42681 527 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 ENOX2Q16206 610 aaKnown RBP11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 VSTM4Q8IW00 320 aa11.82□□□□□ -0.52
CPSF1P1-201ENST00000397477 SOWAHDA6NJG2 315 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 CCP110O43303 1012 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 TNNI2P48788 182 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 ST5P78524 1137 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 TCP10Q12799 353 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 TOGARAM2Q6ZUX3 1019 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 FBXO33Q7Z6M2 555 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 CGNQ9P2M7 1197 aaKnown RBP11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 GGA1Q9UJY5 639 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 AKR1B15C9JRZ8 316 aaPredicted RBP11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 ADAMTS3O15072 1205 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 POLR3GO15318 223 aaPredicted RBP11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 ASIC1P78348 528 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 UBXN1Q04323 297 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 MSL1Q68DK7 614 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 TCP11L1Q9NUJ3 509 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 PPP2R2CQ9Y2T4 447 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 SIPA1L3O60292 1781 aaPredicted RBP11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 SLFN14P0C7P3 912 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 CALML3P27482 149 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 LRRN4CLQ8ND94 238 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 NELFBQ8WX92 580 aa11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 CCDC47Q96A33 483 aaKnown RBP11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 OSBPL5Q9H0X9 879 aaPredicted RBP11.81□□□□□ -0.52
CPSF1P1-201ENST00000397477 ERICH4A6NGS2 130 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 TECP42680 631 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 GSTO1P78417 241 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 FERMT2Q96AC1 680 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 PHF20Q9BVI0 1012 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 MXD3Q9BW11 206 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 TANGO6Q9C0B7 1094 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 TRIM49BA6NDI0 452 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 DDAH1O94760 285 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 PARP1P09874 1014 aaKnown RBP11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 CASP14P31944 242 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 ETF1P62495 437 aaKnown RBP11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 RBL2Q08999 1139 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 STIM1Q13586 685 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 SMCO2A6NFE2 343 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 TRIM37O94972 964 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 CD44P16070 742 aaKnown RBP11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 RAD51AP2Q09MP3 1159 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 DYMQ7RTS9 669 aa11.8□□□□□ -0.52
CPSF1P1-201ENST00000397477 FAM170AA1A519 330 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 ACTN4O43707 911 aaKnown RBP11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 BMP15O95972 392 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 SERPINB2P05120 415 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms