RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 UTRNP46939 3433 aa22.07■■□□□ 1.12
TSPAN4-204ENST00000397404 PALM3A6NDB9 673 aaPredicted RBP22.07■■□□□ 1.12
TSPAN4-204ENST00000397404 EPHX2P34913 555 aa22.07■■□□□ 1.12
TSPAN4-204ENST00000397404 DCAF4Q8WV16 495 aa22.07■■□□□ 1.12
TSPAN4-204ENST00000397404 TNPO1Q92973 898 aaKnown RBP22.07■■□□□ 1.12
TSPAN4-204ENST00000397404 C8orf76Q96K31 380 aa22.07■■□□□ 1.12
TSPAN4-204ENST00000397404 SPZ1Q9BXG8 430 aa22.07■■□□□ 1.12
TSPAN4-204ENST00000397404 CLIP2Q9UDT6 1046 aa22.07■■□□□ 1.12
TSPAN4-204ENST00000397404 FDPSP14324 419 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 RXRAP19793 462 aa22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 HIRAP54198 1017 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 NBPF11Q86T75 865 aa22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 CCDC144CPQ8IYA2 1237 aa22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 FBXO18Q8NFZ0 1043 aa22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 DDX11Q96FC9 970 aa22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 MAD2L2Q9UI95 211 aa22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 ZBTB21Q9ULJ3 1066 aa22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 MTMR6Q9Y217 621 aa22.06■■□□□ 1.12
TSPAN4-204ENST00000397404 hCG_1984214I3L0E3 225 aa22.05■■□□□ 1.12
TSPAN4-204ENST00000397404 F13A1P00488 732 aa22.05■■□□□ 1.12
TSPAN4-204ENST00000397404 GH2P01242 217 aa22.05■■□□□ 1.12
TSPAN4-204ENST00000397404 ATL3Q6DD88 541 aa22.05■■□□□ 1.12
TSPAN4-204ENST00000397404 ZNF713Q8N859 430 aaPredicted RBP22.05■■□□□ 1.12
TSPAN4-204ENST00000397404 SLC26A6Q9BXS9 759 aa22.05■■□□□ 1.12
TSPAN4-204ENST00000397404 ZNF112Q9UJU3 913 aa22.05■■□□□ 1.12
TSPAN4-204ENST00000397404 DDX11L8A8MPP1 907 aa22.04■■□□□ 1.12
TSPAN4-204ENST00000397404 PHF20L1A8MW92 1017 aa22.04■■□□□ 1.12
TSPAN4-204ENST00000397404 PDHBP11177 359 aa22.04■■□□□ 1.12
TSPAN4-204ENST00000397404 FUT2Q10981 343 aa22.04■■□□□ 1.12
TSPAN4-204ENST00000397404 USP48Q86UV5 1035 aa22.04■■□□□ 1.12
TSPAN4-204ENST00000397404 GMCL1Q96IK5 515 aa22.04■■□□□ 1.12
TSPAN4-204ENST00000397404 MYH4Q9Y623 1939 aa22.04■■□□□ 1.12
TSPAN4-204ENST00000397404 VPS37CA5D8V6 355 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 EEF2P13639 858 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 SEPT2Q15019 361 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 CSPP1Q1MSJ5 1256 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 ALG1Q9BT22 464 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 GOPCQ9HD26 462 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 SH3GLB2Q9NR46 395 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 ZDHHC9Q9Y397 364 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 FAM196BA6NMK8 535 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 GDF11O95390 407 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 GUCY1A2P33402 732 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 NF2P35240 595 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 RAB11FIP4Q86YS3 637 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 TAF1DQ9H5J8 278 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 TMX2Q9Y320 296 aa22.03■■□□□ 1.12
TSPAN4-204ENST00000397404 CNTNAP5Q8WYK1 1306 aa22.02■■□□□ 1.12
TSPAN4-204ENST00000397404 KLRF2D3W0D1 207 aa22.02■■□□□ 1.12
TSPAN4-204ENST00000397404 PKP1Q13835 747 aa22.02■■□□□ 1.12
TSPAN4-204ENST00000397404 SAFBQ15424 915 aaKnown RBP eCLIP22.02■■□□□ 1.12
TSPAN4-204ENST00000397404 MIGA2Q7L4E1 593 aa22.02■■□□□ 1.12
TSPAN4-204ENST00000397404 BRAPQ7Z569 592 aa22.02■■□□□ 1.12
TSPAN4-204ENST00000397404 PHKBQ93100 1093 aa22.02■■□□□ 1.12
TSPAN4-204ENST00000397404 PPP1R12BO60237 982 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-204ENST00000397404 ZNF543Q08ER8 600 aa22.01■■□□□ 1.11
TSPAN4-204ENST00000397404 NBPF12Q5TAG4 269 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-204ENST00000397404 SRBD1Q8N5C6 995 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-204ENST00000397404 CCDC12Q8WUD4 166 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-204ENST00000397404 AS3MTQ9HBK9 375 aa22.01■■□□□ 1.11
TSPAN4-204ENST00000397404 ASTN2O75129 1339 aaPredicted RBP22■■□□□ 1.11
TSPAN4-204ENST00000397404 UNCXA6NJT0 531 aa22■■□□□ 1.11
TSPAN4-204ENST00000397404 ATP2B2Q01814 1243 aa22■■□□□ 1.11
TSPAN4-204ENST00000397404 TRAF1Q13077 416 aa22■■□□□ 1.11
TSPAN4-204ENST00000397404 PFKFB3Q16875 520 aaPredicted RBP22■■□□□ 1.11
TSPAN4-204ENST00000397404 NOL9Q5SY16 702 aaKnown RBP22■■□□□ 1.11
TSPAN4-204ENST00000397404 GALNT17Q6IS24 598 aa22■■□□□ 1.11
TSPAN4-204ENST00000397404 TEX2Q8IWB9 1127 aa22■■□□□ 1.11
TSPAN4-204ENST00000397404 RIOX1Q9H6W3 641 aa22■■□□□ 1.11
TSPAN4-204ENST00000397404 BRMS1Q9HCU9 246 aa22■■□□□ 1.11
TSPAN4-204ENST00000397404 MYH6P13533 1939 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 PLEKHA8P1O95397 391 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 SCG2P13521 617 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 SLC1A4P43007 532 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 USP14P54578 494 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 SLFN13Q68D06 897 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 KRT26Q7Z3Y9 468 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 SCYL3Q8IZE3 742 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 LRRC47Q8N1G4 583 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 CCDC148Q8NFR7 591 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 LPAR1Q92633 364 aa21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 RRP36Q96EU6 259 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 SEC63Q9UGP8 760 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-204ENST00000397404 USP17L5A8MUK1 530 aa21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 F5H6K3 240 aa21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 PLA2G6O60733 806 aa21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 BAG4O95429 457 aaKnown RBP21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 CALML3P27482 149 aa21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 KLRC3Q07444 240 aa21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 CDC37L1Q7L3B6 337 aa21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 PICK1Q9NRD5 415 aa21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 V9GY48 417 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-204ENST00000397404 VEGFAP15692 232 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-204ENST00000397404 SIAH1Q8IUQ4 282 aa21.97■■□□□ 1.11
TSPAN4-204ENST00000397404 CDAN1Q8IWY9 1227 aa21.97■■□□□ 1.11
TSPAN4-204ENST00000397404 KLRG1Q96E93 195 aa21.97■■□□□ 1.11
TSPAN4-204ENST00000397404 WDR18Q9BV38 432 aa21.97■■□□□ 1.11
TSPAN4-204ENST00000397404 DOCK1Q14185 1865 aa21.97■■□□□ 1.11
TSPAN4-204ENST00000397404 MCM4P33991 863 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 RRP1BQ14684 758 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms