RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ASNSP08243 561 aa15.8■□□□□ 0.12
MCF2L-209ENST00000397036 EPHX2P34913 555 aa15.8■□□□□ 0.12
MCF2L-209ENST00000397036 SEPT2Q15019 361 aa15.8■□□□□ 0.12
MCF2L-209ENST00000397036 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
MCF2L-209ENST00000397036 FAM177A1Q8N128 213 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-209ENST00000397036 FBXO18Q8NFZ0 1043 aa15.8■□□□□ 0.12
MCF2L-209ENST00000397036 ATP6V1DQ9Y5K8 247 aa15.8■□□□□ 0.12
MCF2L-209ENST00000397036 PARP1P09874 1014 aaKnown RBP15.79■□□□□ 0.12
MCF2L-209ENST00000397036 PDHBP11177 359 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 EEF2P13639 858 aaKnown RBP15.79■□□□□ 0.12
MCF2L-209ENST00000397036 JAG1P78504 1218 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 ICA1Q05084 483 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 GPATCH4Q5T3I0 446 aaKnown RBP15.79■□□□□ 0.12
MCF2L-209ENST00000397036 NBPF12Q5TAG4 269 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-209ENST00000397036 MIGA2Q7L4E1 593 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-209ENST00000397036 SRBD1Q8N5C6 995 aaKnown RBP15.79■□□□□ 0.12
MCF2L-209ENST00000397036 GMCL1P1Q8NEA9 526 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 DCPSQ96C86 337 aaKnown RBP15.79■□□□□ 0.12
MCF2L-209ENST00000397036 GBP4Q96PP9 640 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 SPZ1Q9BXG8 430 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 ZNF341Q9BYN7 854 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 ZBTB21Q9ULJ3 1066 aa15.79■□□□□ 0.12
MCF2L-209ENST00000397036 GDF11O95390 407 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 F13A1P00488 732 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 AKAP17AQ02040 695 aaKnown RBP15.78■□□□□ 0.12
MCF2L-209ENST00000397036 DCAF4Q8WV16 495 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 PHKBQ93100 1093 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 C8orf76Q96K31 380 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 SLC26A6Q9BXS9 759 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 ZSCAN16Q9H4T2 348 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-209ENST00000397036 TAF1DQ9H5J8 278 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-209ENST00000397036 POTECB2RU33 542 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 H3BQV1 296 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 PLEKHA8P1O95397 391 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 IFFO2Q5TF58 517 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 SULF1Q8IWU6 871 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 ALG1Q9BT22 464 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 TMX2Q9Y320 296 aa15.78■□□□□ 0.12
MCF2L-209ENST00000397036 CNTNAP5Q8WYK1 1306 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 KLRF2D3W0D1 207 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 ZNF543Q08ER8 600 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 PKN1Q16512 942 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 STAG2Q8N3U4 1231 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 GMCL1Q96IK5 515 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 ARHGEF10LQ9HCE6 1279 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.11
MCF2L-209ENST00000397036 UTRNP46939 3433 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 MYH8P13535 1937 aa15.77■□□□□ 0.11
MCF2L-209ENST00000397036 VPS37CA5D8V6 355 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-209ENST00000397036 USP17L5A8MUK1 530 aa15.76■□□□□ 0.11
MCF2L-209ENST00000397036 BAG4O95429 457 aaKnown RBP15.76■□□□□ 0.11
MCF2L-209ENST00000397036 XBP1P17861 261 aa15.76■□□□□ 0.11
MCF2L-209ENST00000397036 CDC37L1Q7L3B6 337 aa15.76■□□□□ 0.11
MCF2L-209ENST00000397036 RIOX1Q9H6W3 641 aa15.76■□□□□ 0.11
MCF2L-209ENST00000397036 SH2D4AQ9H788 454 aa15.76■□□□□ 0.11
MCF2L-209ENST00000397036 SCN4AP35499 1836 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 F5H6K3 240 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 DTNBO60941 627 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 MCM4P33991 863 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 KLRC3Q07444 240 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 NFKBIBQ15653 356 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 PFKFB3Q16875 520 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-209ENST00000397036 SHROOM1Q2M3G4 852 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-209ENST00000397036 NOL9Q5SY16 702 aaKnown RBP15.75■□□□□ 0.11
MCF2L-209ENST00000397036 USP17L2Q6R6M4 530 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 USP48Q86UV5 1035 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 CLEC10AQ8IUN9 316 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 LRRC47Q8N1G4 583 aaKnown RBP15.75■□□□□ 0.11
MCF2L-209ENST00000397036 KLRG1Q96E93 195 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 SH3GLB2Q9NR46 395 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 WDR90Q96KV7 1748 aa15.75■□□□□ 0.11
MCF2L-209ENST00000397036 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
MCF2L-209ENST00000397036 CYTH3O43739 400 aa15.74■□□□□ 0.11
MCF2L-209ENST00000397036 TRIM29Q14134 588 aa15.74■□□□□ 0.11
MCF2L-209ENST00000397036 SLFN13Q68D06 897 aa15.74■□□□□ 0.11
MCF2L-209ENST00000397036 ATL3Q6DD88 541 aa15.74■□□□□ 0.11
MCF2L-209ENST00000397036 KRT26Q7Z3Y9 468 aa15.74■□□□□ 0.11
MCF2L-209ENST00000397036 CMTR1Q8N1G2 835 aaKnown RBP15.74■□□□□ 0.11
MCF2L-209ENST00000397036 CCDC82Q8N4S0 544 aa15.74■□□□□ 0.11
MCF2L-209ENST00000397036 WDR18Q9BV38 432 aa15.74■□□□□ 0.11
MCF2L-209ENST00000397036 SCAF8Q9UPN6 1271 aaKnown RBP15.74■□□□□ 0.11
MCF2L-209ENST00000397036 PLA2G6O60733 806 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 SCG2P13521 617 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 PTMSP20962 102 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 ATP2B2Q01814 1243 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 RESTQ13127 1097 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 SLC35G1Q2M3R5 365 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 KRT40Q6A162 431 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 hCG_1984214I3L0E3 225 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 PPFIA3O75145 1194 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 USP2O75604 605 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-209ENST00000397036 NDUFB10O96000 172 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 VEGFAP15692 232 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-209ENST00000397036 U2AF2P26368 475 aaKnown RBP eCLIP15.73■□□□□ 0.11
MCF2L-209ENST00000397036 SLC1A4P43007 532 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 BTNL9Q6UXG8 535 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms