RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 GOLPH3LQ9H4A5 285 aa17.28■□□□□ 0.36
MCF2L-205ENST00000397017 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.36
MCF2L-205ENST00000397017 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-205ENST00000397017 BCL9LQ86UU0 1499 aa17.27■□□□□ 0.36
MCF2L-205ENST00000397017 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 SLC39A14Q15043 492 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 C12orf60Q5U649 245 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 NUP88Q99567 741 aaPredicted RBP17.27■□□□□ 0.35
MCF2L-205ENST00000397017 CSRNP2Q9H175 543 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.27■□□□□ 0.35
MCF2L-205ENST00000397017 CHMP2AO43633 222 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 CUTAO60888 179 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 AKR1B1P15121 316 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 ATL3Q6DD88 541 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 REXO1Q8N1G1 1221 aaKnown RBP17.27■□□□□ 0.35
MCF2L-205ENST00000397017 EPSTI1Q96J88 318 aa17.27■□□□□ 0.35
MCF2L-205ENST00000397017 UVSSAQ2YD98 709 aa17.26■□□□□ 0.35
MCF2L-205ENST00000397017 C11orf57Q6ZUT1 292 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-205ENST00000397017 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
MCF2L-205ENST00000397017 SRGNP10124 158 aa17.26■□□□□ 0.35
MCF2L-205ENST00000397017 UBXN2AP68543 259 aa17.26■□□□□ 0.35
MCF2L-205ENST00000397017 NFIAQ12857 509 aa17.26■□□□□ 0.35
MCF2L-205ENST00000397017 CRAMP1Q96RY5 1269 aa17.26■□□□□ 0.35
MCF2L-205ENST00000397017 TMEM232C9JQI7 657 aa17.26■□□□□ 0.35
MCF2L-205ENST00000397017 NAP1L1P55209 391 aaKnown RBP17.26■□□□□ 0.35
MCF2L-205ENST00000397017 CCDC84Q86UT8 332 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-205ENST00000397017 SMYD4Q8IYR2 804 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-205ENST00000397017 SRBD1Q8N5C6 995 aaKnown RBP17.26■□□□□ 0.35
MCF2L-205ENST00000397017 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
MCF2L-205ENST00000397017 KIAA1468Q9P260 1216 aa17.26■□□□□ 0.35
MCF2L-205ENST00000397017 IPO7O95373 1038 aaKnown RBP17.25■□□□□ 0.35
MCF2L-205ENST00000397017 TECP42680 631 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 DPCR1Q3MIW9 517 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 SLFN13Q68D06 897 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 SUPT20HQ8NEM7 779 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-205ENST00000397017 KCPQ6ZWJ8 1503 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 DDAH1O94760 285 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 IQUBQ8NA54 791 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 NKX2-3Q8TAU0 364 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 NONOQ15233 471 aaKnown RBP eCLIP17.25■□□□□ 0.35
MCF2L-205ENST00000397017 ABCB5Q2M3G0 1257 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 DYMQ7RTS9 669 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 NBPF3Q9H094 633 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 PCDHA5Q9Y5H7 936 aa17.25■□□□□ 0.35
MCF2L-205ENST00000397017 GH2P01242 217 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 CCDC93Q567U6 631 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 TMTC3Q6ZXV5 915 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 SGMS1Q86VZ5 419 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 ZNF408Q9H9D4 720 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-205ENST00000397017 DISP2A7MBM2 1401 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 SEPT2Q15019 361 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 UBE2SQ16763 222 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 PODNQ7Z5L7 613 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 TRIM47Q96LD4 638 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 PCDHAC2Q9Y5I4 1007 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 FLT1P17948 1338 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 KARSQ15046 597 aaKnown RBP17.24■□□□□ 0.35
MCF2L-205ENST00000397017 PPP2R5BQ15173 497 aa17.24■□□□□ 0.35
MCF2L-205ENST00000397017 SYMPKQ92797 1274 aaKnown RBP17.24■□□□□ 0.35
MCF2L-205ENST00000397017 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 PHLPP1O60346 1717 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 CCT6AP40227 531 aaKnown RBP17.23■□□□□ 0.35
MCF2L-205ENST00000397017 ADCY7P51828 1080 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 MRPL12P52815 198 aaKnown RBP17.23■□□□□ 0.35
MCF2L-205ENST00000397017 TMC4Q7Z404 712 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 DDX39AO00148 427 aaKnown RBP17.23■□□□□ 0.35
MCF2L-205ENST00000397017 N4BP3O15049 544 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 CMA1P23946 247 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 POSTNQ15063 836 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 LONRF3Q496Y0 759 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 POLR3EQ9NVU0 708 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 BMP15O95972 392 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 TBC1D10BQ4KMP7 808 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-205ENST00000397017 TBC1D7Q9P0N9 293 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 PCDHA1Q9Y5I3 950 aa17.23■□□□□ 0.35
MCF2L-205ENST00000397017 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
MCF2L-205ENST00000397017 CBFA2T2O43439 604 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 DPEP1P16444 411 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 LRMPQ12912 555 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 PRAMEF18Q5VWM3 479 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 NRBP1Q9UHY1 535 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 FOXP2O15409 715 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 WDHD1O75717 1129 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-205ENST00000397017 CC2D2BQ6DHV5 1058 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 ZKSCAN5Q9Y2L8 839 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 CACNA1FO60840 1977 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 OFD1O75665 1012 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 TTLL1O95922 423 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 SKILP12757 684 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 KANK3Q6NY19 840 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 PROM2Q8N271 834 aa17.22■□□□□ 0.35
MCF2L-205ENST00000397017 ALDH8A1Q9H2A2 487 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-205ENST00000397017 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 FOXN1O15353 648 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms