RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 SYNPO2Q9UMS6 1093 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 RABGAP1Q9Y3P9 1069 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 DOCK3Q8IZD9 2030 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 AKR1B1P15121 316 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 MAPK4P31152 587 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 GRK4P32298 578 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 ICA1Q05084 483 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 PDE4BQ07343 736 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 COG2Q14746 738 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 MCMDC2Q4G0Z9 681 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 NAPBQ9H115 298 aa13.23□□□□□ -0.29
NDUFA9-202ENST00000396655 HIP1O00291 1037 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 RASA1P20936 1047 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 FLT3LGP49771 235 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 MFAP1P55081 439 aaKnown RBP13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 ERVK-9P63128 1117 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 ERVK-24P63145 666 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 CCNA1P78396 465 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 PRKCZQ05513 592 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 HABP4Q5JVS0 413 aaKnown RBP13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 PPP4R3BQ5MIZ7 849 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 MB21D1Q8N884 522 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 MKL1Q969V6 931 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 VCPKMTQ9H867 229 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 NYAP2Q9P242 653 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 ANAPC4Q9UJX5 808 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 RBBP6Q7Z6E9 1792 aaKnown RBP13.22□□□□□ -0.29
NDUFA9-202ENST00000396655 ZMYM6O95789 1325 aa13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 TRIOBPQ9H2D6 2365 aa13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 ZSWIM8A7E2V4 1837 aa13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 SMIM22K7EJ46 135 aa13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 EEF2P13639 858 aaKnown RBP13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 RPAP3Q9H6T3 665 aaPredicted RBP13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 TXNRD2Q9NNW7 524 aa13.21□□□□□ -0.29
NDUFA9-202ENST00000396655 GREB1LQ9C091 1923 aaPredicted RBP13.21□□□□□ -0.3
NDUFA9-202ENST00000396655 WDR46O15213 610 aaKnown RBP13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 FOXP2O15409 715 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 ADCY3O60266 1144 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 FGRP09769 529 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 SDSP20132 328 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 NT5C2P49902 561 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 UBXN2AP68543 259 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 PPARAQ07869 468 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 SOCS4Q8WXH5 440 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 GABRQQ9UN88 632 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
NDUFA9-202ENST00000396655 IGKV6D-41A0A0C4DH26 115 aa13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 Q3C1V9 767 aa13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 TRMT44Q8IYL2 757 aaKnown RBP13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 NEDD1Q8NHV4 660 aa13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 SH3TC2Q8TF17 1288 aa13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 RILPL2Q969X0 211 aa13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 FAM227BQ96M60 508 aa13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 ADAMTS5Q9UNA0 930 aa13.19□□□□□ -0.3
NDUFA9-202ENST00000396655 A0A0D9SFI3 127 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 CNMDO75829 334 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 TTLL1O95922 423 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 FGAP02671 866 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 GJB1P08034 283 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 HSPD1P10809 573 aaKnown RBP13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 NMIQ13287 307 aaPredicted RBP13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 SHCBP1Q8NEM2 672 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 USP6NLQ92738 828 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 TANGO6Q9C0B7 1094 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
NDUFA9-202ENST00000396655 CUL9Q8IWT3 2517 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 RLFQ13129 1914 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 STRNO43815 780 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 ORC4O43929 436 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 VPS53Q5VIR6 699 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 PLEKHH3Q7Z736 793 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 PAGR1Q9BTK6 254 aa13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 BIN2Q9UBW5 565 aaPredicted RBP13.17□□□□□ -0.3
NDUFA9-202ENST00000396655 A0A0C4DFX4 3053 aa13.16□□□□□ -0.3
NDUFA9-202ENST00000396655 SLC15A5A6NIM6 579 aa13.16□□□□□ -0.3
NDUFA9-202ENST00000396655 F5H6K3 240 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms