RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 FERMT2Q96AC1 680 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 GPR108Q9NPR9 543 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 PLXNA1Q9UIW2 1896 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-202ENST00000396629 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-202ENST00000396629 CLTBP09497 229 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 GUCY1A2P33402 732 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 G3BP1Q13283 466 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCFD1-202ENST00000396629 RAB3GAP1Q15042 981 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 ABCB5Q2M3G0 1257 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 CERKLQ49MI3 558 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-202ENST00000396629 TTC39AQ5SRH9 613 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 PRAMEF19Q5SWL8 479 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 TRMT2AQ8IZ69 625 aaKnown RBP10.33□□□□□ -0.76
SCFD1-202ENST00000396629 ZNF512BQ96KM6 892 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-202ENST00000396629 SPATC1LQ9H0A9 340 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 HOXC10Q9NYD6 342 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 SERPINB13Q9UIV8 391 aa10.33□□□□□ -0.76
SCFD1-202ENST00000396629 CT47B1P0C2W7 299 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-202ENST00000396629 ERCC3P19447 782 aa10.32□□□□□ -0.76
SCFD1-202ENST00000396629 DNAJB2P25686 324 aa10.32□□□□□ -0.76
SCFD1-202ENST00000396629 COG2Q14746 738 aa10.32□□□□□ -0.76
SCFD1-202ENST00000396629 FAM47AQ5JRC9 791 aa10.32□□□□□ -0.76
SCFD1-202ENST00000396629 ABRAQ8N0Z2 381 aa10.32□□□□□ -0.76
SCFD1-202ENST00000396629 ZNF576Q9H609 170 aa10.32□□□□□ -0.76
SCFD1-202ENST00000396629 CABP5Q9NP86 173 aa10.32□□□□□ -0.76
SCFD1-202ENST00000396629 SLC5A4Q9NY91 659 aa10.32□□□□□ -0.76
SCFD1-202ENST00000396629 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
SCFD1-202ENST00000396629 RAG1P15918 1043 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 CYP7A1P22680 504 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 SHMT1P34896 483 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 FPGSQ05932 587 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 CCDC158Q5M9N0 1113 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 CERS3Q8IU89 383 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 ATXN2LQ8WWM7 1075 aaKnown RBP10.31□□□□□ -0.76
SCFD1-202ENST00000396629 PIH1D3Q9NQM4 214 aaKnown RBP10.31□□□□□ -0.76
SCFD1-202ENST00000396629 RAPGEFL1Q9UHV5 662 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 NRBP1Q9UHY1 535 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 COL11A1P12107 1806 aaPredicted RBP10.31□□□□□ -0.76
SCFD1-202ENST00000396629 CDH23Q9H251 3354 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 PNMA6EA0A0J9YXQ4 647 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 ZAP70P43403 619 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 USP5P45974 858 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 TTC6Q86TZ1 520 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 ARHGAP45Q92619 1136 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 MAML3Q96JK9 1138 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 DBNDD2Q9BQY9 259 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 MROH8Q9H579 483 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 NAV1Q8NEY1 1877 aa10.31□□□□□ -0.76
SCFD1-202ENST00000396629 TNNI3KQ59H18 835 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 AKNAD1Q5T1N1 836 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 MB21D1Q8N884 522 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 TIFAQ96CG3 184 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 XPNPEP3Q9NQH7 507 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 FPGT-TNNI3KV9GXZ4 949 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 ROBO3Q96MS0 1386 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 MYH8P13535 1937 aa10.3□□□□□ -0.76
SCFD1-202ENST00000396629 A0A1W2PQ45 241 aaPredicted RBP10.29□□□□□ -0.76
SCFD1-202ENST00000396629 A0A1W2PQY0 241 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 A0A1W2PRG0 241 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 GNAI2P04899 355 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 RARBP10826 455 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 DSG3P32926 999 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 PLA2G5P39877 138 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 GABPAQ06546 454 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 FAAP100Q0VG06 881 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 SEPT2Q15019 361 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 ANKRD33Q7Z3H0 272 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 RNF180Q86T96 592 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 TOX2Q96NM4 488 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 ASB2Q96Q27 587 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 TMEM39AQ9NV64 488 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 PLCD1P51178 756 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 MIGA1Q8NAN2 632 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 GAS2L1Q99501 681 aaPredicted RBP10.29□□□□□ -0.76
SCFD1-202ENST00000396629 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
SCFD1-202ENST00000396629 THEGQ9P2T0 379 aa10.29□□□□□ -0.76
SCFD1-202ENST00000396629 GBF1Q92538 1859 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
SCFD1-202ENST00000396629 PGK1P00558 417 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 TIMP1P01033 207 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 KIAA1755Q5JYT7 1200 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 RASIP1Q5U651 963 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 TMED8Q6PL24 325 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-202ENST00000396629 NCAPG2Q86XI2 1143 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.28□□□□□ -0.761e-9■□□□□ 11.2
SCFD1-202ENST00000396629 TANGO6Q9C0B7 1094 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 DIS3Q9Y2L1 958 aaKnown RBP10.28□□□□□ -0.76
SCFD1-202ENST00000396629 SLC25A27O95847 323 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 FCER1AP12319 257 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 RARSP54136 660 aaKnown RBP10.28□□□□□ -0.76
SCFD1-202ENST00000396629 MRPS5P82675 430 aaKnown RBP10.28□□□□□ -0.76
SCFD1-202ENST00000396629 POLA2Q14181 598 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 SLC44A5Q8NCS7 719 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 ADAMTS19Q8TE59 1207 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 TINF2Q9BSI4 451 aa10.28□□□□□ -0.76
SCFD1-202ENST00000396629 MUC3AQ02505 3323 aa10.27□□□□□ -0.76
SCFD1-202ENST00000396629 DCDC2CA8MYV0 355 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 ADAMTS4O75173 837 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms