RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 FEZ1Q99689 392 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 CSRNP2Q9H175 543 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 VPS16Q9H269 839 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 BSDC1Q9NW68 430 aaPredicted RBP10.6□□□□□ -0.71
NDE1-201ENST00000396354 CDKL5O76039 1030 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 CHRM1P11229 460 aaPredicted RBP10.59□□□□□ -0.71
NDE1-201ENST00000396354 POSTNQ15063 836 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 GRIK5Q16478 980 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 AKNAD1Q5T1N1 836 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 NOSTRINQ8IVI9 506 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 SGIP1Q9BQI5 828 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 NOL10Q9BSC4 688 aaKnown RBP10.59□□□□□ -0.71
NDE1-201ENST00000396354 PPP2R2CQ9Y2T4 447 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 PNPLA7Q6ZV29 1317 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 IRS2Q9Y4H2 1338 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 WNT7AO00755 349 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 CASQ1P31415 396 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 EARS2Q5JPH6 523 aaKnown RBP10.59□□□□□ -0.71
NDE1-201ENST00000396354 SGMS1Q86VZ5 419 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 HSD3B7Q9H2F3 369 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 MAN1B1Q9UKM7 699 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
NDE1-201ENST00000396354 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 PRDX5P30044 214 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 RASGRP4Q8TDF6 673 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 GTPBP4Q9BZE4 634 aaKnown RBP10.58□□□□□ -0.72
NDE1-201ENST00000396354 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 INTS13Q9NVM9 706 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 ABL1P00519 1130 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 MCM7P33993 719 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 STAG1Q8WVM7 1258 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 CDC5LQ99459 802 aaKnown RBP10.58□□□□□ -0.72
NDE1-201ENST00000396354 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
NDE1-201ENST00000396354 RPS6KA4O75676 772 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 CYP2D6P10635 497 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 TOB1P50616 345 aaPredicted RBP10.58□□□□□ -0.72
NDE1-201ENST00000396354 MRPS25P82663 173 aaKnown RBP10.58□□□□□ -0.72
NDE1-201ENST00000396354 PPARAQ07869 468 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 SART3Q15020 963 aaKnown RBP10.58□□□□□ -0.72
NDE1-201ENST00000396354 SLC10A5Q5PT55 438 aa10.58□□□□□ -0.72
NDE1-201ENST00000396354 VEGFAP15692 232 aaPredicted RBP10.57□□□□□ -0.72
NDE1-201ENST00000396354 NFIXQ14938 502 aa10.57□□□□□ -0.72
NDE1-201ENST00000396354 PTPAQ15257 358 aa10.57□□□□□ -0.72
NDE1-201ENST00000396354 KCTD19Q17RG1 926 aaPredicted RBP10.57□□□□□ -0.72
NDE1-201ENST00000396354 NBPF5PQ86XG9 351 aaPredicted RBP10.57□□□□□ -0.72
NDE1-201ENST00000396354 OSBPL5Q9H0X9 879 aaPredicted RBP10.57□□□□□ -0.72
NDE1-201ENST00000396354 ADAMTS3O15072 1205 aa10.57□□□□□ -0.72
NDE1-201ENST00000396354 TERF2Q15554 542 aa10.57□□□□□ -0.72
NDE1-201ENST00000396354 FBXO33Q7Z6M2 555 aa10.57□□□□□ -0.72
NDE1-201ENST00000396354 ACRBPQ8NEB7 543 aa10.57□□□□□ -0.72
NDE1-201ENST00000396354 CTNND2Q9UQB3 1225 aa10.57□□□□□ -0.72
NDE1-201ENST00000396354 SLFN14P0C7P3 912 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 PNMA6AP0CW24 399 aaPredicted RBP10.56□□□□□ -0.72
NDE1-201ENST00000396354 DNA2P51530 1060 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 KIF4BQ2VIQ3 1234 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 PPFIBP1Q86W92 1011 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 POTEDQ86YR6 584 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 NSUN4Q96CB9 384 aaKnown RBP10.56□□□□□ -0.72
NDE1-201ENST00000396354 MAP3K14Q99558 947 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 CPVLQ9H3G5 476 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 RABEP2Q9H5N1 569 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 MRPL44Q9H9J2 332 aaKnown RBP10.56□□□□□ -0.72
NDE1-201ENST00000396354 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 MAGEB6P1A0A0J9YX57 407 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 ANKRD65E5RJM6 399 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 CBFA2T2O43439 604 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 RPS8P62241 208 aaKnown RBP10.56□□□□□ -0.72
NDE1-201ENST00000396354 ST5P78524 1137 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 MECOMQ03112 1051 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 PPP2R3AQ06190 1150 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 UBE4AQ14139 1066 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 SEC23AQ15436 765 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 ZNF569Q5MCW4 686 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 PIK3AP1Q6ZUJ8 805 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 VSTM4Q8IW00 320 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 ZNF654Q8IZM8 581 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 TMEM87BQ96K49 555 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 NACAP1Q9BZK3 213 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 TNKSO95271 1327 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 A0A087X0B3 334 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 ENC1O14682 589 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 LIFRP42702 1097 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 RESP18Q5W5W9 173 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 ATL3Q6DD88 541 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 IGSF22Q8N9C0 903 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 PCMTD1Q96MG8 357 aaPredicted RBP10.56□□□□□ -0.72
NDE1-201ENST00000396354 SETDB2Q96T68 719 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 TAB2Q9NYJ8 693 aa10.56□□□□□ -0.72
NDE1-201ENST00000396354 ZMYND10O75800 440 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 FAM193AP78312 1265 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 RBL2Q08999 1139 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 SYMPKQ92797 1274 aaKnown RBP10.55□□□□□ -0.72
NDE1-201ENST00000396354 GPKOWQ92917 476 aaPredicted RBP eCLIP10.55□□□□□ -0.72
NDE1-201ENST00000396354 CAPZA3Q96KX2 299 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 NUP88Q99567 741 aaPredicted RBP10.55□□□□□ -0.72
NDE1-201ENST00000396354 ARGLU1Q9NWB6 273 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms