RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NCAPG2Q86XI2 1143 aa19.64■□□□□ 0.73
DDR1-229ENST00000396342 SHCBP1Q8NEM2 672 aa19.64■□□□□ 0.73
DDR1-229ENST00000396342 USP6NLQ92738 828 aa19.64■□□□□ 0.73
DDR1-229ENST00000396342 PRKAG2Q9UGJ0 569 aa19.64■□□□□ 0.73
DDR1-229ENST00000396342 WDR46O15213 610 aaKnown RBP19.63■□□□□ 0.73
DDR1-229ENST00000396342 ZFYP08048 801 aaPredicted RBP19.63■□□□□ 0.73
DDR1-229ENST00000396342 CYP2D6P10635 497 aa19.63■□□□□ 0.73
DDR1-229ENST00000396342 CDK8P49336 464 aa19.63■□□□□ 0.73
DDR1-229ENST00000396342 CCL14Q16627 93 aa19.63■□□□□ 0.73
DDR1-229ENST00000396342 C12orf60Q5U649 245 aa19.63■□□□□ 0.73
DDR1-229ENST00000396342 DYNLL2Q96FJ2 89 aa19.63■□□□□ 0.73
DDR1-229ENST00000396342 SPATC1LQ9H0A9 340 aa19.63■□□□□ 0.73
DDR1-229ENST00000396342 STAP2Q9UGK3 403 aa19.63■□□□□ 0.73
DDR1-229ENST00000396342 TMX2Q9Y320 296 aa19.63■□□□□ 0.73
DDR1-229ENST00000396342 ATAD5Q96QE3 1844 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 PRKAB2O43741 272 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 SLC25A27O95847 323 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 APPP05067 770 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 HOXC6P09630 235 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 CCND3P30281 292 aaPredicted RBP19.62■□□□□ 0.73
DDR1-229ENST00000396342 COPB2P35606 906 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 GRB14Q14449 540 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 SPICE1Q8N0Z3 855 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 SLC44A5Q8NCS7 719 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 ARRDC4Q8NCT1 418 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 VCPKMTQ9H867 229 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 BTBD7Q9P203 1132 aa19.62■□□□□ 0.73
DDR1-229ENST00000396342 ZMYND8Q9ULU4 1186 aaPredicted RBP19.62■□□□□ 0.73
DDR1-229ENST00000396342 ERC2O15083 957 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 CNMDO75829 334 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 FCER1AP12319 257 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 GNAT2P19087 354 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 DSG3P32926 999 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 GUCY1A2P33402 732 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 C16orf86Q6ZW13 317 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 LBHD1Q9BQE6 289 aaPredicted RBP19.61■□□□□ 0.73
DDR1-229ENST00000396342 MOV10L1Q9BXT6 1211 aaKnown RBP19.61■□□□□ 0.73
DDR1-229ENST00000396342 NACAP1Q9BZK3 213 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 DDX20Q9UHI6 824 aaKnown RBP19.61■□□□□ 0.73
DDR1-229ENST00000396342 CENPFP49454 3210 aa19.61■□□□□ 0.73
DDR1-229ENST00000396342 SLC3A2P08195 630 aaKnown RBP19.6■□□□□ 0.73
DDR1-229ENST00000396342 AKR1B1P15121 316 aa19.6■□□□□ 0.73
DDR1-229ENST00000396342 ERCC3P19447 782 aa19.6■□□□□ 0.73
DDR1-229ENST00000396342 ADORA2AP29274 412 aa19.6■□□□□ 0.73
DDR1-229ENST00000396342 KCTD2Q14681 263 aa19.6■□□□□ 0.73
DDR1-229ENST00000396342 GIMAP6Q6P9H5 292 aa19.6■□□□□ 0.73
DDR1-229ENST00000396342 A0A1W2PRG0 241 aa19.59■□□□□ 0.73
DDR1-229ENST00000396342 KBTBD13C9JR72 458 aa19.59■□□□□ 0.73
DDR1-229ENST00000396342 MYCNP04198 464 aaPredicted RBP19.59■□□□□ 0.73
DDR1-229ENST00000396342 TDO2P48775 406 aa19.59■□□□□ 0.73
DDR1-229ENST00000396342 OLFML2BQ68BL8 750 aa19.59■□□□□ 0.73
DDR1-229ENST00000396342 ABRAQ8N0Z2 381 aa19.59■□□□□ 0.73
DDR1-229ENST00000396342 UBE2OQ9C0C9 1292 aaKnown RBP19.59■□□□□ 0.73
DDR1-229ENST00000396342 SENP6Q9GZR1 1112 aaPredicted RBP19.59■□□□□ 0.73
DDR1-229ENST00000396342 CEP290O15078 2479 aa19.59■□□□□ 0.73
DDR1-229ENST00000396342 MINDY4BA8MYZ0 360 aa19.58■□□□□ 0.72
DDR1-229ENST00000396342 SMARCA5O60264 1052 aaPredicted RBP19.58■□□□□ 0.72
DDR1-229ENST00000396342 EEF2P13639 858 aaKnown RBP19.58■□□□□ 0.72
DDR1-229ENST00000396342 SYN1P17600 705 aa19.58■□□□□ 0.72
DDR1-229ENST00000396342 CYP2C19P33261 490 aa19.58■□□□□ 0.72
DDR1-229ENST00000396342 BMP8BP34820 402 aa19.58■□□□□ 0.72
DDR1-229ENST00000396342 ZNF444Q8N0Y2 327 aaPredicted RBP19.58■□□□□ 0.72
DDR1-229ENST00000396342 KBTBD3Q8NAB2 608 aa19.58■□□□□ 0.72
DDR1-229ENST00000396342 MYH1P12882 1939 aa19.57■□□□□ 0.72
DDR1-229ENST00000396342 RNF113AO15541 343 aaKnown RBP19.57■□□□□ 0.72
DDR1-229ENST00000396342 LHX8Q68G74 356 aa19.57■□□□□ 0.72
DDR1-229ENST00000396342 CTR9Q6PD62 1173 aa19.57■□□□□ 0.72
DDR1-229ENST00000396342 APPBP2Q92624 585 aa19.57■□□□□ 0.72
DDR1-229ENST00000396342 ATG4CQ96DT6 458 aa19.57■□□□□ 0.72
DDR1-229ENST00000396342 SIPA1L1O43166 1804 aa19.57■□□□□ 0.72
DDR1-229ENST00000396342 FOCADQ5VW36 1801 aa19.56■□□□□ 0.72
DDR1-229ENST00000396342 CYP2D7A0A087X1C5 515 aa19.56■□□□□ 0.72
DDR1-229ENST00000396342 DNM1LO00429 736 aa19.56■□□□□ 0.72
DDR1-229ENST00000396342 MMP19Q99542 508 aa19.56■□□□□ 0.72
DDR1-229ENST00000396342 PUS7LQ9H0K6 701 aaKnown RBP19.56■□□□□ 0.72
DDR1-229ENST00000396342 DCTPP1Q9H773 170 aa19.56■□□□□ 0.72
DDR1-229ENST00000396342 ISY1Q9ULR0 285 aaKnown RBP19.56■□□□□ 0.72
DDR1-229ENST00000396342 SBK1Q52WX2 424 aa19.55■□□□□ 0.72
DDR1-229ENST00000396342 PPP4R3BQ5MIZ7 849 aa19.55■□□□□ 0.72
DDR1-229ENST00000396342 C20orf194Q5TEA3 1177 aa19.55■□□□□ 0.72
DDR1-229ENST00000396342 NPLOC4Q8TAT6 608 aa19.55■□□□□ 0.72
DDR1-229ENST00000396342 STRBPQ96SI9 672 aaKnown RBP19.55■□□□□ 0.72
DDR1-229ENST00000396342 PRO3102Q9H379 93 aa19.55■□□□□ 0.72
DDR1-229ENST00000396342 STAT3P40763 770 aa19.54■□□□□ 0.72
DDR1-229ENST00000396342 MAGEA10P43363 369 aaPredicted RBP19.54■□□□□ 0.72
DDR1-229ENST00000396342 PDE4BQ07343 736 aa19.54■□□□□ 0.72
DDR1-229ENST00000396342 SLFNL1Q499Z3 407 aa19.54■□□□□ 0.72
DDR1-229ENST00000396342 POTEEQ6S8J3 1075 aa19.54■□□□□ 0.72
DDR1-229ENST00000396342 STK11IPQ8N1F8 1099 aa19.54■□□□□ 0.72
DDR1-229ENST00000396342 GDF15Q99988 308 aa19.54■□□□□ 0.72
DDR1-229ENST00000396342 FLRT1Q9NZU1 646 aa19.54■□□□□ 0.72
DDR1-229ENST00000396342 CNPY2Q9Y2B0 182 aa19.54■□□□□ 0.72
DDR1-229ENST00000396342 MKI67P46013 3256 aaKnown RBP19.54■□□□□ 0.72
DDR1-229ENST00000396342 TTC41PQ6P2S7 1318 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 TRIOBPQ9H2D6 2365 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 SEPT4O43236 478 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 ZBED4O75132 1171 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 COL6A1P12109 1028 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 EVX2Q03828 476 aa19.53■□□□□ 0.72
DDR1-229ENST00000396342 CLEC10AQ8IUN9 316 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms