RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 ERICH6BQ5W0A0 696 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 REPS2Q8NFH8 660 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 SDR42E1Q8WUS8 393 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 COA7Q96BR5 231 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 MROH8Q9H579 483 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 NDUFB9Q9Y6M9 179 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 SLC25A27O95847 323 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 DSG3P32926 999 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 PSMC4P43686 418 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 NKX3-2P78367 333 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 STAG1Q8WVM7 1258 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 EDC3Q96F86 508 aaKnown RBP7.87□□□□□ -1.15
LMO3-205ENST00000396205 RBPJLQ9UBG7 517 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 SAP30BPQ9UHR5 308 aaKnown RBP7.87□□□□□ -1.15
LMO3-205ENST00000396205 PTCH2Q9Y6C5 1203 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 SPDYE16A6NNV3 312 aaPredicted RBP7.87□□□□□ -1.15
LMO3-205ENST00000396205 USP17L12C9JPN9 530 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 USP17L21D6R901 530 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 GJA8P48165 433 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 MLLT1Q03111 559 aaPredicted RBP7.87□□□□□ -1.15
LMO3-205ENST00000396205 POTEEQ6S8J3 1075 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 ZNF467Q7Z7K2 595 aaPredicted RBP7.87□□□□□ -1.15
LMO3-205ENST00000396205 CCDC171Q6TFL3 1326 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 LTBP2Q14767 1821 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 GJB1P08034 283 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 UBXN2AP68543 259 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 IRX3P78415 501 aaPredicted RBP7.87□□□□□ -1.15
LMO3-205ENST00000396205 ICA1Q05084 483 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 PDE4BQ07343 736 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 COG2Q14746 738 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 TTC14Q96N46 770 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 APBA2Q99767 749 aa7.87□□□□□ -1.15
LMO3-205ENST00000396205 ZBTB47Q9UFB7 747 aaPredicted RBP7.87□□□□□ -1.15
LMO3-205ENST00000396205 IGHDP01880 384 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 HMGCRP04035 888 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 GRK4P32298 578 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 PPARAQ07869 468 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 TKFCQ3LXA3 575 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 ANKRD45Q5TZF3 282 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 TEX2Q8IWB9 1127 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 ANP32EQ9BTT0 268 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 FSD1Q9BTV5 496 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 CPA4Q9UI42 421 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 A0A1W2PRG0 241 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 EPB41L2O43491 1005 aaKnown RBP7.86□□□□□ -1.15
LMO3-205ENST00000396205 PRKAB2O43741 272 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 GDF11O95390 407 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 CYP2C8P10632 490 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 AKR1B1P15121 316 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 SLC9C1Q4G0N8 1177 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 BTNL9Q6UXG8 535 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 SMCR8Q8TEV9 937 aaPredicted RBP7.86□□□□□ -1.15
LMO3-205ENST00000396205 MTMR4Q9NYA4 1195 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 FAM196BA6NMK8 535 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 TTLL1O95922 423 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 SEPT2Q15019 361 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 RIOX2Q8IUF8 465 aa7.86□□□□□ -1.15
LMO3-205ENST00000396205 P2RX7Q99572 595 aaKnown RBP7.86□□□□□ -1.15
LMO3-205ENST00000396205 SNHG28P0DPA3 235 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 SDSP20132 328 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 RGS2P41220 211 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 TTC22Q5TAA0 569 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 EXOC6Q8TAG9 804 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 OTUD7AQ8TE49 926 aaPredicted RBP7.85□□□□□ -1.15
LMO3-205ENST00000396205 FEM1BQ9UK73 627 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 PPP1R9AQ9ULJ8 1098 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 MSCO60682 206 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 PTPREP23469 700 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 PLEKHH3Q7Z736 793 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 FAM160B2Q86V87 743 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 DCAF4Q8WV16 495 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 ARHGAP39Q9C0H5 1083 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 RNF41Q9H4P4 317 aaPredicted RBP7.85□□□□□ -1.15
LMO3-205ENST00000396205 RPAP3Q9H6T3 665 aaPredicted RBP7.85□□□□□ -1.15
LMO3-205ENST00000396205 CYP2D6P10635 497 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 GHRHRQ02643 423 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 PRKCZQ05513 592 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 GPR142Q7Z601 462 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 SHISA4Q96DD7 197 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 OGDHLQ9ULD0 1010 aa7.85□□□□□ -1.15
LMO3-205ENST00000396205 TNPO2O14787 897 aaKnown RBP7.84□□□□□ -1.15
LMO3-205ENST00000396205 MAP2K5Q13163 448 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 SAMD3Q8N6K7 520 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 NUDT12Q9BQG2 462 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 NAPBQ9H115 298 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 TXNRD2Q9NNW7 524 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 RPTORQ8N122 1335 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 SYNGAP1Q96PV0 1343 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 HSPD1P10809 573 aaKnown RBP7.84□□□□□ -1.15
LMO3-205ENST00000396205 EEF2P13639 858 aaKnown RBP7.84□□□□□ -1.15
LMO3-205ENST00000396205 C1orf53Q5VUE5 145 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 CENPQQ7L2Z9 268 aaPredicted RBP7.84□□□□□ -1.15
LMO3-205ENST00000396205 ANKRD13CQ8N6S4 541 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 RAET1EQ8TD07 263 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 ACER1Q8TDN7 264 aa7.84□□□□□ -1.15
LMO3-205ENST00000396205 TDO2P48775 406 aa7.83□□□□□ -1.16
LMO3-205ENST00000396205 MAMDC4Q6UXC1 1216 aa7.83□□□□□ -1.16
LMO3-205ENST00000396205 MAP3K14Q99558 947 aa7.83□□□□□ -1.16
LMO3-205ENST00000396205 SLC5A4Q9NY91 659 aa7.83□□□□□ -1.16
LMO3-205ENST00000396205 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms