RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 STAG2Q8N3U4 1231 aa13.94□□□□□ -0.18
ITGB1-202ENST00000396033 GNAQP50148 359 aa13.94□□□□□ -0.18
ITGB1-202ENST00000396033 NEDD1Q8NHV4 660 aa13.94□□□□□ -0.18
ITGB1-202ENST00000396033 KIAA1468Q9P260 1216 aa13.94□□□□□ -0.18
ITGB1-202ENST00000396033 MAD2L2Q9UI95 211 aa13.94□□□□□ -0.18
ITGB1-202ENST00000396033 BAZ2BQ9UIF8 2168 aaKnown RBP13.94□□□□□ -0.18
ITGB1-202ENST00000396033 NLRP5P59047 1200 aa13.94□□□□□ -0.18
ITGB1-202ENST00000396033 PODNQ7Z5L7 613 aa13.94□□□□□ -0.18
ITGB1-202ENST00000396033 USP40Q9NVE5 1235 aa13.94□□□□□ -0.18
ITGB1-202ENST00000396033 EARS2Q5JPH6 523 aaKnown RBP13.93□□□□□ -0.18
ITGB1-202ENST00000396033 TEKT1Q969V4 418 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 ADAMTSL1Q8N6G6 1762 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 SLX4Q8IY92 1834 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 TRIM75PA6NK02 468 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 CEP57L1Q8IYX8 460 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 CNKSR1Q969H4 720 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 TIGD1Q96MW7 591 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 FBXO2Q9UK22 296 aaPredicted RBP13.93□□□□□ -0.18
ITGB1-202ENST00000396033 FAM237AA0A1B0GTK4 181 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 GOLGA6L19H0YKK7 550 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 NPY5RQ15761 445 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 DDX4Q9NQI0 724 aaKnown RBP13.93□□□□□ -0.18
ITGB1-202ENST00000396033 ZKSCAN5Q9Y2L8 839 aa13.93□□□□□ -0.18
ITGB1-202ENST00000396033 PTPREP23469 700 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 SPECC1Q5M775 1068 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 KCNQ5Q9NR82 932 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 KCNH3Q9ULD8 1083 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 HHIPL2Q6UWX4 724 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 CEP95Q96GE4 821 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 ECE2O60344 883 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 VEGFAP15692 232 aaPredicted RBP13.92□□□□□ -0.18
ITGB1-202ENST00000396033 GRIN1Q05586 938 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 IQCB1Q15051 598 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 GPKOWQ92917 476 aaPredicted RBP eCLIP13.92□□□□□ -0.182e-6■■■■□ 21.7
ITGB1-202ENST00000396033 TNFRSF25Q93038 417 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 NAT10Q9H0A0 1025 aaKnown RBP13.92□□□□□ -0.18
ITGB1-202ENST00000396033 FAM13BQ9NYF5 915 aa13.92□□□□□ -0.18
ITGB1-202ENST00000396033 BECN2A8MW95 431 aa13.91□□□□□ -0.18
ITGB1-202ENST00000396033 CDC42EP5Q6NZY7 148 aa13.91□□□□□ -0.18
ITGB1-202ENST00000396033 CRKP46108 304 aa13.91□□□□□ -0.18
ITGB1-202ENST00000396033 NOM1Q5C9Z4 860 aaKnown RBP13.91□□□□□ -0.18
ITGB1-202ENST00000396033 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
ITGB1-202ENST00000396033 GOLGA8HP0CJ92 632 aa13.91□□□□□ -0.18
ITGB1-202ENST00000396033 TOP1P11387 765 aaKnown RBP13.91□□□□□ -0.18
ITGB1-202ENST00000396033 RASGRP2Q7LDG7 609 aa13.91□□□□□ -0.18
ITGB1-202ENST00000396033 KIAA0825Q8IV33 1275 aa13.91□□□□□ -0.18
ITGB1-202ENST00000396033 ARID3AQ99856 593 aa13.91□□□□□ -0.18
ITGB1-202ENST00000396033 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
ITGB1-202ENST00000396033 BIN1O00499 593 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 CALML3P27482 149 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 APOBEC3HQ6NTF7 200 aaKnown RBP13.9□□□□□ -0.18
ITGB1-202ENST00000396033 LZTS2Q9BRK4 669 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 OSBPL5Q9H0X9 879 aaPredicted RBP13.9□□□□□ -0.18
ITGB1-202ENST00000396033 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
ITGB1-202ENST00000396033 GABPAQ06546 454 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 TTC38Q5R3I4 469 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 STRIP1Q5VSL9 837 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 PIK3AP1Q6ZUJ8 805 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 TRIM5Q9C035 493 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 SH3GLB2Q9NR46 395 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.9□□□□□ -0.18
ITGB1-202ENST00000396033 PLIN4Q96Q06 1357 aa13.9□□□□□ -0.18
ITGB1-202ENST00000396033 BMP15O95972 392 aa13.9□□□□□ -0.19
ITGB1-202ENST00000396033 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.19
ITGB1-202ENST00000396033 DPCR1Q3MIW9 517 aa13.9□□□□□ -0.19
ITGB1-202ENST00000396033 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.19
ITGB1-202ENST00000396033 SPC24Q8NBT2 197 aa13.9□□□□□ -0.19
ITGB1-202ENST00000396033 KLRF2D3W0D1 207 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 CYTH3O43739 400 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 AOC3Q16853 763 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 KRBA2Q6ZNG9 492 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 DHX40Q8IX18 779 aaKnown RBP13.89□□□□□ -0.19
ITGB1-202ENST00000396033 SERPINB13Q9UIV8 391 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 WNT7AO00755 349 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 ZNF174Q15697 407 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 DACT2Q5SW24 774 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 AOPEPQ8N6M6 819 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 CSRNP2Q9H175 543 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 PRDM10Q9NQV6 1147 aa13.89□□□□□ -0.19
ITGB1-202ENST00000396033 AKR1B1P15121 316 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 RBM5P52756 815 aaKnown RBP eCLIP13.88□□□□□ -0.19
ITGB1-202ENST00000396033 NLRP12P59046 1061 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 PNOCQ13519 176 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 WWC2Q6AWC2 1192 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 BLIDQ8IZY5 108 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 ZDHHC15Q96MV8 337 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 SWAP70Q9UH65 585 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
ITGB1-202ENST00000396033 ZNF75DP51815 510 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
ITGB1-202ENST00000396033 NFIAQ12857 509 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 USP17L2Q6R6M4 530 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 PCDHA4Q9UN74 947 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 MORC2Q9Y6X9 1032 aaPredicted RBP13.88□□□□□ -0.19
ITGB1-202ENST00000396033 SCN9AQ15858 1988 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms