RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PIDD1Q9HB75 910 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 ZNF451Q9Y4E5 1061 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 LRIG2O94898 1065 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 ALX3O95076 343 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 GRIA2P42262 883 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 NBPF12Q5TAG4 269 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 ANKRD34AQ69YU3 496 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 HEATR6Q6AI08 1181 aaKnown RBP7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 FDX2Q6P4F2 183 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 KRT26Q7Z3Y9 468 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 DHX37Q8IY37 1157 aaKnown RBP7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 TMEM130Q8N3G9 435 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 NINJ1Q92982 152 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 MFSD3Q96ES6 412 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 APBA2Q99767 749 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 ACSS3Q9H6R3 686 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 NCOA5Q9HCD5 579 aaKnown RBP7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 KLHL42Q9P2K6 505 aa7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 MRPS23Q9Y3D9 190 aaKnown RBP7.12□□□□□ -1.27
HMGB1P10-201ENST00000395823 A0A087X0B3 334 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 AGRPO00253 132 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 IRS4O14654 1257 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 GNB5O14775 395 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 NAT2P11245 290 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 PABPC4Q13310 644 aaKnown RBP eCLIP7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 TAF7LQ5H9L4 462 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 Q6ZS46 218 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 THNSL2Q86YJ6 484 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 CCDC144CPQ8IYA2 1237 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 RIN3Q8TB24 985 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 OSBP2Q969R2 916 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 KREMEN1Q96MU8 473 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 CLUHP3Q96NS8 147 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 AARSD1Q9BTE6 412 aaKnown RBP7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 DHRS4Q9BTZ2 278 aa7.11□□□□□ -1.27
HMGB1P10-201ENST00000395823 TRAV20A0A0B4J274 112 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 DYNC1LI2O43237 492 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 RFPL3O75679 317 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 SLITRK5O94991 958 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 RAPGEF3O95398 923 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 RAB6AP20340 208 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 TRIM28Q13263 835 aaKnown RBP7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 ANKRD39Q53RE8 183 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 NIM1KQ8IY84 436 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 LRRN4CLQ8ND94 238 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 MRGPRX3Q96LB0 322 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 PSMG3-AS1Q96PY0 264 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 MKRN2Q9H000 416 aaKnown RBP7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 PCOLCE2Q9UKZ9 415 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 CEP131Q9UPN4 1083 aa7.1□□□□□ -1.27
HMGB1P10-201ENST00000395823 TRBV23-1A0A0A0MS06 115 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 CCDC163A0A0D9SF12 145 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 SPDYE3A6NKU9 549 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 KCNQ2O43526 872 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 AUHQ13825 339 aaKnown RBP7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 HSP90AA2PQ14568 343 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 GRIK4Q16099 956 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 PLEKHG6Q3KR16 790 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 CDPF1Q6NVV7 123 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 LETMD1Q6P1Q0 360 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 SVOPQ8N4V2 548 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 MFSD2AQ8NA29 543 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 MIPEPQ99797 713 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 SEMA6CQ9H3T2 930 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 GP6Q9HCN6 339 aa7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 SSU72Q9NP77 194 aaKnown RBP7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 DDX56Q9NY93 547 aaKnown RBP7.09□□□□□ -1.27
HMGB1P10-201ENST00000395823 GSG1L2A8MUP6 293 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 PLD2O14939 933 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 WFS1O76024 890 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 FGFR1P11362 822 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 PABPC1P11940 636 aaKnown RBP7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 MYCLP1P12525 358 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 CD247P20963 164 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 STAT3P40763 770 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 CDH24Q86UP0 819 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 JAMLQ86YT9 394 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 C7orf61Q8IZ16 206 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 BVESQ8NE79 360 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 ADCY4Q8NFM4 1077 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 PPP1R14AQ96A00 147 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 CDC6Q99741 560 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 CWC22Q9HCG8 908 aaKnown RBP7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 WHRNQ9P202 907 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 LRP2BPQ9P2M1 347 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 EMC9Q9Y3B6 208 aa7.08□□□□□ -1.28
HMGB1P10-201ENST00000395823 FAM83GA6ND36 823 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 PRODHO43272 600 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 MARCH6O60337 910 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 C6orf222P0C671 652 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 SDSP20132 328 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 CDKN1CP49918 316 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 FNDC3BQ53EP0 1204 aaKnown RBP7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 RNF180Q86T96 592 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 SCUBE1Q8IWY4 988 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 FAM46AQ96IP4 442 aaKnown RBP7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 UBL7Q96S82 380 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms