RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
PTPN20-206ENST00000395722 NBPF11Q86T75 865 aa17.61■□□□□ 0.41
PTPN20-206ENST00000395722 USP48Q86UV5 1035 aa17.61■□□□□ 0.41
PTPN20-206ENST00000395722 LRRC47Q8N1G4 583 aaKnown RBP17.61■□□□□ 0.41
PTPN20-206ENST00000395722 RRAGCQ9HB90 399 aa17.61■□□□□ 0.41
PTPN20-206ENST00000395722 MAD2L2Q9UI95 211 aa17.61■□□□□ 0.41
PTPN20-206ENST00000395722 PALM3A6NDB9 673 aaPredicted RBP17.6■□□□□ 0.41
PTPN20-206ENST00000395722 DLK2Q6UY11 383 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 CDC37L1Q7L3B6 337 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 KLRG1Q96E93 195 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 POTEIP0CG38 1075 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 POTEJP0CG39 1038 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 PDHBP11177 359 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 INPP5BP32019 993 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 GMCL1P1Q8NEA9 526 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 CDCA5Q96FF9 252 aa17.6■□□□□ 0.41
PTPN20-206ENST00000395722 A0A1W2PRG0 241 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 USP2O75604 605 aaPredicted RBP17.59■□□□□ 0.41
PTPN20-206ENST00000395722 PLEKHA8P1O95397 391 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
PTPN20-206ENST00000395722 NOL9Q5SY16 702 aaKnown RBP17.59■□□□□ 0.41
PTPN20-206ENST00000395722 DDX11Q96FC9 970 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 GLIS2Q9BZE0 524 aaPredicted RBP17.59■□□□□ 0.41
PTPN20-206ENST00000395722 USP17L5A8MUK1 530 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 PDCP20941 246 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 SYT1P21579 422 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 GNAQP50148 359 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 NUCB2P80303 420 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 ATP2B2Q01814 1243 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 RASGRP2Q7LDG7 609 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 STAG2Q8N3U4 1231 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.59■□□□□ 0.41
PTPN20-206ENST00000395722 WRNIP1Q96S55 665 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 LZTS2Q9BRK4 669 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 ARHGEF10LQ9HCE6 1279 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 ORC3Q9UBD5 711 aaPredicted RBP17.59■□□□□ 0.41
PTPN20-206ENST00000395722 TMX2Q9Y320 296 aa17.59■□□□□ 0.41
PTPN20-206ENST00000395722 CNTNAP5Q8WYK1 1306 aa17.58■□□□□ 0.4
PTPN20-206ENST00000395722 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.4
PTPN20-206ENST00000395722 LDHDQ86WU2 507 aa17.58■□□□□ 0.4
PTPN20-206ENST00000395722 SRBD1Q8N5C6 995 aaKnown RBP17.58■□□□□ 0.4
PTPN20-206ENST00000395722 PHKBQ93100 1093 aa17.58■□□□□ 0.4
PTPN20-206ENST00000395722 RNF26Q9BY78 433 aaPredicted RBP17.58■□□□□ 0.4
PTPN20-206ENST00000395722 NMRK2Q9NPI5 230 aa17.58■□□□□ 0.4
PTPN20-206ENST00000395722 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.58■□□□□ 0.4
PTPN20-206ENST00000395722 ZDHHC9Q9Y397 364 aa17.58■□□□□ 0.4
PTPN20-206ENST00000395722 KIF3AQ9Y496 699 aa17.58■□□□□ 0.4
PTPN20-206ENST00000395722 PARP1P09874 1014 aaKnown RBP17.57■□□□□ 0.4
PTPN20-206ENST00000395722 SMARCA1P28370 1054 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 PKP1Q13835 747 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 SLC35G1Q2M3R5 365 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 ASPRV1Q53RT3 343 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 RGS22Q8NE09 1264 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 ACER1Q8TDN7 264 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 OTOFQ9HC10 1997 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 PRPF3O43395 683 aaKnown RBP17.57■□□□□ 0.4
PTPN20-206ENST00000395722 BRD1O95696 1058 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 SSRP1Q08945 709 aaKnown RBP17.57■□□□□ 0.4
PTPN20-206ENST00000395722 ZNF543Q08ER8 600 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 MAP3K11Q16584 847 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 USP17L2Q6R6M4 530 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 CMTR1Q8N1G2 835 aaKnown RBP17.57■□□□□ 0.4
PTPN20-206ENST00000395722 DCAF4Q8WV16 495 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 GMCL1Q96IK5 515 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 FZD1Q9UP38 647 aa17.57■□□□□ 0.4
PTPN20-206ENST00000395722 STX6O43752 255 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 PPFIA3O75145 1194 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 ECE1P42892 770 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 LARP1BQ659C4 914 aaKnown RBP17.56■□□□□ 0.4
PTPN20-206ENST00000395722 FAM184AQ8NB25 1140 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 SLC26A6Q9BXS9 759 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 SH2D4AQ9H788 454 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 PHIPQ8WWQ0 1821 aa17.56■□□□□ 0.4
PTPN20-206ENST00000395722 KLRF2D3W0D1 207 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 F5H6K3 240 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
PTPN20-206ENST00000395722 NDUFB10O96000 172 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 NF2P35240 595 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 KLRC3Q07444 240 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 GPATCH4Q5T3I0 446 aaKnown RBP17.55■□□□□ 0.4
PTPN20-206ENST00000395722 SLFN13Q68D06 897 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 TRIM22Q8IYM9 498 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 ZKSCAN4Q969J2 545 aaPredicted RBP17.55■□□□□ 0.4
PTPN20-206ENST00000395722 WDR18Q9BV38 432 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 MTMR6Q9Y217 621 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 DEXIO95424 95 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 MAP3K9P80192 1104 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
PTPN20-206ENST00000395722 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.55■□□□□ 0.4
PTPN20-206ENST00000395722 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
PTPN20-206ENST00000395722 MTMR7Q9Y216 660 aa17.55■□□□□ 0.4
PTPN20-206ENST00000395722 MYH6P13533 1939 aa17.54■□□□□ 0.4
PTPN20-206ENST00000395722 WDR33Q9C0J8 1336 aaKnown RBP17.54■□□□□ 0.4
PTPN20-206ENST00000395722 CYTH3O43739 400 aa17.54■□□□□ 0.4
PTPN20-206ENST00000395722 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
PTPN20-206ENST00000395722 PTPRAP18433 802 aa17.54■□□□□ 0.4
PTPN20-206ENST00000395722 PKN1Q16512 942 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms