RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
PHACTR3-205ENST00000395636 TRMT1Q9NXH9 659 aaKnown RBP13.62□□□□□ -0.23
PHACTR3-205ENST00000395636 F8W031 263 aaPredicted RBP13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 CDKL5O76039 1030 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 CORO7P57737 925 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 FAM160A1Q05DH4 1040 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 CERS5Q8N5B7 392 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 WDR66Q8TBY9 1149 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 C7orf43Q8WVR3 580 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 ZC3H12CQ9C0D7 883 aaKnown RBP13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 PSDA5PKW4 1024 aaPredicted RBP13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 CCDC69A6NI79 296 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 CYP2D6P10635 497 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 KCNA3P22001 575 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 ZNF165P49910 485 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 NBPF20Q3BBV1 942 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 STYK1Q6J9G0 422 aa13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 ZCCHC17Q9NP64 241 aaKnown RBP13.61□□□□□ -0.23
PHACTR3-205ENST00000395636 ADAMTSL1Q8N6G6 1762 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 EFCAB8A8MWE9 144 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 DPEP1P16444 411 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 CCZ1BP86790 482 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 CCZ1P86791 482 aaPredicted RBP13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 TMC4Q7Z404 712 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 EFCAB13Q8IY85 973 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 FSIP1Q8NA03 581 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 SH3RF3Q8TEJ3 882 aaPredicted RBP13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 RBM28Q9NW13 759 aaKnown RBP13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 CCP110O43303 1012 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 NRDCO43847 1150 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 YEATS4O95619 227 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 TBC1D8O95759 1140 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 METAP2P50579 478 aaKnown RBP eCLIP13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 STK38Q15208 465 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 ADALQ6DHV7 355 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 C10orf71Q711Q0 1435 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 KCNG4Q8TDN1 519 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 ZKSCAN3Q9BRR0 538 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 GOLPH3LQ9H4A5 285 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 MAST2Q6P0Q8 1798 aa13.6□□□□□ -0.23
PHACTR3-205ENST00000395636 A0A1W2PQ27 194 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 A0A1W2PQ64 194 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 A0A1W2PQD8 194 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 PRDM1O75626 825 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 USP8P40818 1118 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 SF3A1Q15459 793 aaKnown RBP13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 TACO1Q9BSH4 297 aaKnown RBP13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 DNAJC25Q9H1X3 360 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 ARFGAP3Q9NP61 516 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 POLR3EQ9NVU0 708 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 USP17L12C9JPN9 530 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 USP17L21D6R901 530 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 GNAT2P19087 354 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 KCNJ6P48051 423 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 E2F4Q16254 413 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 STX1AQ16623 288 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 AOC3Q16853 763 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 CC2D1AQ6P1N0 951 aaPredicted RBP13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 LINC00301Q8NCQ3 95 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 CNNM2Q9H8M5 875 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 PPP1R1BQ9UD71 204 aaPredicted RBP13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 PCDHA7Q9UN72 937 aa13.59□□□□□ -0.23
PHACTR3-205ENST00000395636 RXRAP19793 462 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 PPARAQ07869 468 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 APOA5Q6Q788 366 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 NACAP1Q9BZK3 213 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 DCP1AQ9NPI6 582 aaPredicted RBP13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 ZSWIM5Q9P217 1185 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 CDK5RAP2Q96SN8 1893 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 SNED1Q8TER0 1413 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 ZBTB43O43298 467 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 USP17L8P0C7I0 530 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 JAKMIP3Q5VZ66 844 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 SPTY2D1Q68D10 685 aaPredicted RBP13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 NFXL1Q6ZNB6 911 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 IGDCC4Q8TDY8 1250 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 CNKSR1Q969H4 720 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 RTFDC1Q9BY42 306 aaPredicted RBP13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 KRT23Q9C075 422 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 COA1Q9GZY4 146 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 PCDHAC2Q9Y5I4 1007 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 PHLPP2Q6ZVD8 1323 aa13.58□□□□□ -0.24
PHACTR3-205ENST00000395636 LIFRP42702 1097 aa13.57□□□□□ -0.24
PHACTR3-205ENST00000395636 SCNN1DP51172 638 aa13.57□□□□□ -0.24
PHACTR3-205ENST00000395636 KIF23Q02241 960 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms