RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 CABP7Q86V35 215 aa16.53■□□□□ 0.24
PPP1CB-203ENST00000395366 FAM84BQ96KN1 310 aaPredicted RBP16.53■□□□□ 0.24
PPP1CB-203ENST00000395366 DBNDD1Q9H9R9 158 aa16.53■□□□□ 0.24
PPP1CB-203ENST00000395366 BCCIPQ9P287 314 aaKnown RBP eCLIP16.53■□□□□ 0.24
PPP1CB-203ENST00000395366 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
PPP1CB-203ENST00000395366 CBX1P83916 185 aa16.53■□□□□ 0.24
PPP1CB-203ENST00000395366 PPP1R2P41236 205 aa16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 BAG1Q99933 345 aaPredicted RBP16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 ZSWIM4Q9H7M6 989 aa16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 MMP10P09238 476 aa16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 CERKLQ49MI3 558 aaPredicted RBP16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 CCDC65Q8IXS2 484 aa16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 XPO4Q9C0E2 1151 aaKnown RBP16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 LUC7L2Q9Y383 392 aaKnown RBP16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 WDR19Q8NEZ3 1342 aa16.52■□□□□ 0.24
PPP1CB-203ENST00000395366 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 AKR1B15C9JRZ8 316 aaPredicted RBP16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 NFIXQ14938 502 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 AXDND1Q5T1B0 1012 aaPredicted RBP16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 GALNT17Q6IS24 598 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 CNNM4Q6P4Q7 775 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 CNGA4Q8IV77 575 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 FAM13AO94988 1023 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 GBP3Q9H0R5 595 aa16.52■□□□□ 0.23
PPP1CB-203ENST00000395366 PAFAH1B1P43034 410 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 TUBB4AP04350 444 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 SF3B3Q15393 1217 aaKnown RBP16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 IMPACTQ9P2X3 320 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 NTSR2O95665 410 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 CSGALNACT2Q8N6G5 542 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 USP8P40818 1118 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 EXOSC10Q01780 885 aaKnown RBP16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 PLS1Q14651 629 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 HAUS3Q68CZ6 603 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 EHBP1Q8NDI1 1231 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 TAF6LQ9Y6J9 622 aa16.51■□□□□ 0.23
PPP1CB-203ENST00000395366 NPR1P16066 1061 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 PRPF3O43395 683 aaKnown RBP16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 PCDHA5Q9Y5H7 936 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 TRAF5O00463 557 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 ERLIN2O94905 339 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 CYP2D6P10635 497 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 KARSQ15046 597 aaKnown RBP16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 SKIDA1Q1XH10 827 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 NEK8Q86SG6 692 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 TBC1D8BQ0IIM8 1120 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 SYT10Q6XYQ8 523 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 SYMPKQ92797 1274 aaKnown RBP16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 ZNF512BQ96KM6 892 aaPredicted RBP16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 CSRNP2Q9H175 543 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 CD209Q9NNX6 404 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 JADE2Q9NQC1 790 aa16.5■□□□□ 0.23
PPP1CB-203ENST00000395366 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 ICA1Q05084 483 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 DYMQ7RTS9 669 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 LY9Q9HBG7 655 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 HS2ST1Q7LGA3 356 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 SH3RF3Q8TEJ3 882 aaPredicted RBP16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 CCDC17Q96LX7 622 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 CCDC42Q96M95 316 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 COA1Q9GZY4 146 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 DCP1AQ9NPI6 582 aaPredicted RBP16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 PKD2L1Q9P0L9 805 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 CFBP00751 764 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 RASGRP4Q8TDF6 673 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 NOC4LQ9BVI4 516 aaKnown RBP16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 PSTPIP2Q9H939 334 aa16.49■□□□□ 0.23
PPP1CB-203ENST00000395366 KDM4FA0A1W2PPD8 638 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 TCP10L2B9ZVM9 353 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 CHMP2AO43633 222 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 NOP2P46087 812 aaKnown RBP16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 CHMP4BP1P59074 171 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 A0A087WWV3 80 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 TRAPPC10P48553 1259 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 INTS5Q6P9B9 1019 aaKnown RBP16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 SCLT1Q96NL6 688 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 ZBTB21Q9ULJ3 1066 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 MON2Q7Z3U7 1717 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 PLEKHA8P1O95397 391 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 OR52Z1P0C646 297 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 NCAPH2Q6IBW4 605 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 NEK11Q8NG66 645 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 CCDC102AQ96A19 550 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 SWAP70Q9UH65 585 aa16.48■□□□□ 0.23
PPP1CB-203ENST00000395366 PLEKHG2Q9H7P9 1386 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms