RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 SH3RF1Q7Z6J0 888 aa16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 TTF2Q9UNY4 1162 aaKnown RBP16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 STXBP3O00186 592 aa16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 ARL6IP4Q66PJ3 421 aaKnown RBP16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 GINM1Q9NU53 330 aa16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 SARSP49591 514 aaKnown RBP16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 DYNLL2Q96FJ2 89 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 NMT2O60551 498 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 ATP2C1P98194 919 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 FAM83AQ86UY5 434 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 DIS3L2Q8IYB7 885 aaKnown RBP16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 DEFB129Q9H1M3 183 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 TSPY2A6NKD2 308 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 XBP1P17861 261 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 CALML3P27482 149 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 KRT2P35908 639 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 PRPHP41219 470 aa16.36■□□□□ 0.21
CDC42SE2-202ENST00000395246 LAD1O00515 517 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 SLC26A4O43511 780 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 MYO1BO43795 1136 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 CDC25BP30305 580 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 MAPKAPK5Q8IW41 473 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 CTCFLQ8NI51 663 aaPredicted RBP16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 KAT14Q9H8E8 782 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 SERPINB13Q9UIV8 391 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 CEP131Q9UPN4 1083 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 UBE2Q2LH0YL09 131 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 IQCB1Q15051 598 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 CCAR1Q8IX12 1150 aaKnown RBP16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 FERMT2Q96AC1 680 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 TFIP11Q9UBB9 837 aaKnown RBP16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 PCDHA4Q9UN74 947 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 PDHBP11177 359 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 CHRNA5P30532 468 aa16.35■□□□□ 0.21
CDC42SE2-202ENST00000395246 LOXHD1Q8IVV2 1947 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 CCDC192P0DO97 292 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 TRIM29Q14134 588 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 SF3A1Q15459 793 aaKnown RBP16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 FAM47AQ5JRC9 791 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 SIAH1Q8IUQ4 282 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 GMCL1Q96IK5 515 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 FTOQ9C0B1 505 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 GZF1Q9H116 711 aaPredicted RBP16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 GJB4Q9NTQ9 266 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 TSPY3P0CV98 308 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 TSPY8P0CW00 308 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 FAM200AQ8TCP9 573 aa16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 HERC5Q9UII4 1024 aaKnown RBP16.34■□□□□ 0.21
CDC42SE2-202ENST00000395246 GHRHRQ02643 423 aa16.33■□□□□ 0.21
CDC42SE2-202ENST00000395246 ZNF444Q8N0Y2 327 aaPredicted RBP16.33■□□□□ 0.21
CDC42SE2-202ENST00000395246 CEP95Q96GE4 821 aa16.33■□□□□ 0.21
CDC42SE2-202ENST00000395246 PANK2Q9BZ23 570 aa16.33■□□□□ 0.21
CDC42SE2-202ENST00000395246 USP40Q9NVE5 1235 aa16.33■□□□□ 0.21
CDC42SE2-202ENST00000395246 PI4KBQ9UBF8 816 aa16.33■□□□□ 0.21
CDC42SE2-202ENST00000395246 SPDYE2BA6NHP3 402 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 BTBD18B2RXH4 712 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 SPDYE6P0CI01 402 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 RXRAP19793 462 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 RPS12P25398 132 aaKnown RBP16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 TTLL1O95922 423 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 PTGER2P43116 358 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 TYRO3Q06418 890 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
CDC42SE2-202ENST00000395246 CRYGNQ8WXF5 182 aa16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 PRDM1O75626 825 aa16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 NDUFA8P51970 172 aa16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 RRP12Q5JTH9 1297 aaKnown RBP16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 KRI1Q8N9T8 703 aaKnown RBP16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 MBOAT7Q96N66 472 aa16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 MAF1Q9H063 256 aa16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 MYH7BA7E2Y1 1941 aa16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 SAFBQ15424 915 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 MSL1Q68DK7 614 aa16.32■□□□□ 0.2
CDC42SE2-202ENST00000395246 DPEP1P16444 411 aa16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 HOXA7P31268 230 aaPredicted RBP16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 ZNF543Q08ER8 600 aa16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 FAM43AQ8N2R8 423 aa16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 CCDC148Q8NFR7 591 aa16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 OXER1Q8TDS5 423 aa16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 PDGFDQ9GZP0 370 aaPredicted RBP16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 EARS2Q5JPH6 523 aaKnown RBP16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 GPATCH4Q5T3I0 446 aaKnown RBP16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 PLA2G4DQ86XP0 818 aa16.31■□□□□ 0.2
CDC42SE2-202ENST00000395246 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms