RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 C16orf86Q6ZW13 317 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 RAPH1Q70E73 1250 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 NLRP14Q86W24 1093 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 TPH2Q8IWU9 490 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 EPS8L3Q8TE67 593 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 GTF3C2Q8WUA4 911 aaPredicted RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 C7orf25Q9BPX7 421 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 CLIP1P30622 1438 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 ZNF254O75437 659 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 LGR5O75473 907 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 PYGLP06737 847 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 PCP11498 1178 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 PCNAP12004 261 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 CNGA1P29973 690 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 PDE6CP51160 858 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 CCNHP51946 323 aaPredicted RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 NLRP6P59044 892 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 SMC1AQ14683 1233 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 TNNI3KQ59H18 835 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 MTERF4Q7Z6M4 381 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 RNF180Q86T96 592 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 TRIM42Q8IWZ5 723 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 ZNF454Q8N9F8 522 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 ZNF540Q8NDQ6 660 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 GBP4Q96PP9 640 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 CYP4F11Q9HBI6 524 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 SPO11Q9Y5K1 396 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 ZSCAN9O15535 394 aaPredicted RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 FMNL1O95466 1100 aaPredicted RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 GUCY2FP51841 1108 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 ZNF280AP59817 542 aaPredicted RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 MPP1Q00013 466 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 PDE12Q6L8Q7 609 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 HOMER1Q86YM7 354 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 DPF3Q92784 378 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 ARHGEF2Q92974 986 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 RSRC1Q96IZ7 334 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 RMDN2Q96LZ7 410 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 ELAC2Q9BQ52 826 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 SRRTQ9BXP5 876 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 TRIM7Q9C029 511 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 MSRB2Q9Y3D2 182 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 LACTBL1A8MY62 500 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 HSPA1AP0DMV8 641 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 HSPA1BP0DMV9 641 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 ITIH3Q06033 890 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 TRIM28Q13263 835 aaKnown RBP4.84□□□□□ -1.63
HERC4-204ENST00000395198 FAM47EQ6ZV65 393 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 STRA8Q7Z7C7 330 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 AFAP1L1Q8TED9 768 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 FNIP1Q8TF40 1166 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 POF1BQ8WVV4 589 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 MAML1Q92585 1016 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 KIF12Q96FN5 646 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 UIMC1Q96RL1 719 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 SIRPGQ9P1W8 387 aa4.84□□□□□ -1.63
HERC4-204ENST00000395198 CCDC88BA6NC98 1476 aa4.84□□□□□ -1.64
HERC4-204ENST00000395198 CEP164Q9UPV0 1460 aa4.84□□□□□ -1.64
HERC4-204ENST00000395198 A0A1B0GVC2 190 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 C9IYK1 514 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 AHCYL1O43865 530 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 XPAP23025 273 aaPredicted RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 PBLDP30039 288 aaPredicted RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 HOXC12P31275 282 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 CTNNA1P35221 906 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 MCM2P49736 904 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 IRX1P78414 480 aaPredicted RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 ASIC2Q16515 512 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 SLC5A9Q2M3M2 681 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 USP38Q8NB14 1042 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 FAM174AQ8TBP5 190 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 TRPM4Q8TD43 1214 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 GJA10Q969M2 543 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 MS4A4AQ96JQ5 239 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 SLC26A8Q96RN1 970 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 TEX13BQ9BXU2 312 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 MAK16Q9BXY0 300 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 TNKS2Q9H2K2 1166 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 NLRC4Q9NPP4 1024 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 EPS15L1Q9UBC2 864 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 PCDHGC5Q9Y5F6 944 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 MYCP01106 439 aaPredicted RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 MATR3P43243 847 aaKnown RBP eCLIP4.83□□□□□ -1.649e-6■■■■□ 23
HERC4-204ENST00000395198 SLC12A2P55011 1212 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 PDIA5Q14554 519 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 SSPNQ14714 243 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 ODF1Q14990 250 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 ZNF579Q8NAF0 562 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 DDX20Q9UHI6 824 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 FAM170AA1A519 330 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 TNFRSF21O75509 655 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 RRP1P56182 461 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 TMF1P82094 1093 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 TRAF1Q13077 416 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 GNPTABQ3T906 1256 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 DIEXFQ68CQ4 756 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 TTC19Q6DKK2 380 aaPredicted RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 BTNL9Q6UXG8 535 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 GALNT13Q8IUC8 556 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 IL17RDQ8NFM7 739 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms