RNA–Protein interactions for RNA: ENST00000395111.7

NFIC-202, Transcript of nuclear factor I C, humanhuman

TSL 2 BASIC

Gene NFIC, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-202ENST00000395111 CTCFLQ8NI51 663 aaPredicted RBP18.51■□□□□ 0.55
NFIC-202ENST00000395111 PIBF1Q8WXW3 757 aa18.51■□□□□ 0.55
NFIC-202ENST00000395111 PHKBQ93100 1093 aa18.51■□□□□ 0.55
NFIC-202ENST00000395111 FAM217BQ9NTX9 383 aaPredicted RBP18.51■□□□□ 0.55
NFIC-202ENST00000395111 PTPDC1A2A3K4 754 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 USP17L5A8MUK1 530 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 ASNSP08243 561 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 USP17L2Q6R6M4 530 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 KLRG1Q96E93 195 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 A0A1W2PRG0 241 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 PPP1R12BO60237 982 aaPredicted RBP18.5■□□□□ 0.55
NFIC-202ENST00000395111 CTNND1O60716 968 aaKnown RBP18.5■□□□□ 0.55
NFIC-202ENST00000395111 SPICE1Q8N0Z3 855 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 STAG2Q8N3U4 1231 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 NSUN7Q8NE18 718 aaKnown RBP18.5■□□□□ 0.55
NFIC-202ENST00000395111 INTS4Q96HW7 963 aaKnown RBP18.5■□□□□ 0.55
NFIC-202ENST00000395111 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
NFIC-202ENST00000395111 PICK1Q9NRD5 415 aa18.5■□□□□ 0.55
NFIC-202ENST00000395111 DHX16O60231 1041 aaKnown RBP18.49■□□□□ 0.55
NFIC-202ENST00000395111 CALM1P0DP23 149 aa18.49■□□□□ 0.55
NFIC-202ENST00000395111 CALM2P0DP24 149 aa18.49■□□□□ 0.55
NFIC-202ENST00000395111 CALM3P0DP25 149 aa18.49■□□□□ 0.55
NFIC-202ENST00000395111 CCDC96Q2M329 555 aa18.49■□□□□ 0.55
NFIC-202ENST00000395111 ARHGEF10LQ9HCE6 1279 aa18.49■□□□□ 0.55
NFIC-202ENST00000395111 GPCPD1Q9NPB8 672 aa18.49■□□□□ 0.55
NFIC-202ENST00000395111 NYAP2Q9P242 653 aa18.49■□□□□ 0.55
NFIC-202ENST00000395111 hCG_1642624A0A1W2PR95 340 aa18.48■□□□□ 0.55
NFIC-202ENST00000395111 NOVP48745 357 aa18.48■□□□□ 0.55
NFIC-202ENST00000395111 FOXD4L5Q5VV16 416 aaPredicted RBP18.48■□□□□ 0.55
NFIC-202ENST00000395111 SCYL3Q8IZE3 742 aa18.48■□□□□ 0.55
NFIC-202ENST00000395111 FOXD4L4Q8WXT5 416 aaPredicted RBP18.48■□□□□ 0.55
NFIC-202ENST00000395111 FEZ1Q99689 392 aa18.48■□□□□ 0.55
NFIC-202ENST00000395111 SLC26A6Q9BXS9 759 aa18.48■□□□□ 0.55
NFIC-202ENST00000395111 ZNF112Q9UJU3 913 aa18.48■□□□□ 0.55
NFIC-202ENST00000395111 UBE2Q2LH0YL09 131 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 PARP1P09874 1014 aaKnown RBP18.47■□□□□ 0.55
NFIC-202ENST00000395111 DGKZQ13574 1117 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 GRM4Q14833 912 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 PPP4R3BQ5MIZ7 849 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 CPLX2Q6PUV4 134 aaKnown RBP18.47■□□□□ 0.55
NFIC-202ENST00000395111 KCTD1Q719H9 257 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 FAM184AQ8NB25 1140 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 NUP88Q99567 741 aaPredicted RBP18.47■□□□□ 0.55
NFIC-202ENST00000395111 CCDC196A0A1B0GTZ2 297 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 PDHBP11177 359 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 KIF5BP33176 963 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 IREB2P48200 963 aaKnown RBP18.47■□□□□ 0.55
NFIC-202ENST00000395111 VGLL4Q14135 290 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.47■□□□□ 0.55
NFIC-202ENST00000395111 MAD2L2Q9UI95 211 aa18.47■□□□□ 0.55
NFIC-202ENST00000395111 F5H6K3 240 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 MAP3K9P80192 1104 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 KLRC3Q07444 240 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 PKP1Q13835 747 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 SAMD1Q6SPF0 538 aaPredicted RBP18.46■□□□□ 0.55
NFIC-202ENST00000395111 NBPF11Q86T75 865 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 SRBD1Q8N5C6 995 aaKnown RBP18.46■□□□□ 0.55
NFIC-202ENST00000395111 CLMNQ96JQ2 1002 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 LLPHQ9BRT6 129 aaKnown RBP18.46■□□□□ 0.55
NFIC-202ENST00000395111 UBA5Q9GZZ9 404 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 ELP3Q9H9T3 547 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 VAT1LQ9HCJ6 419 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 RBM28Q9NW13 759 aaKnown RBP18.46■□□□□ 0.55
NFIC-202ENST00000395111 CSADQ9Y600 493 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 ZHX2Q9Y6X8 837 aa18.46■□□□□ 0.55
NFIC-202ENST00000395111 GREB1LQ9C091 1923 aaPredicted RBP18.45■□□□□ 0.54
NFIC-202ENST00000395111 TRIM75PA6NK02 468 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 CDKL5O76039 1030 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 NDUFB10O96000 172 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 PTPRAP18433 802 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 SLC1A4P43007 532 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 SSRP1Q08945 709 aaKnown RBP18.45■□□□□ 0.54
NFIC-202ENST00000395111 NTRK3Q16288 839 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.45■□□□□ 0.54
NFIC-202ENST00000395111 TMTC3Q6ZXV5 915 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 MKL1Q969V6 931 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 ORC3Q9UBD5 711 aaPredicted RBP18.45■□□□□ 0.54
NFIC-202ENST00000395111 CELF2O95319 508 aaKnown RBP18.45■□□□□ 0.54
NFIC-202ENST00000395111 RCAN1P53805 252 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 SPP2Q13103 211 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 KIAA1755Q5JYT7 1200 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 TTBK2Q6IQ55 1244 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 SMARCC2Q8TAQ2 1214 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 AIFM3Q96NN9 605 aa18.45■□□□□ 0.54
NFIC-202ENST00000395111 CWC22Q9HCG8 908 aaKnown RBP18.45■□□□□ 0.54
NFIC-202ENST00000395111 KLRF2D3W0D1 207 aa18.44■□□□□ 0.54
NFIC-202ENST00000395111 FDPSP14324 419 aaKnown RBP18.44■□□□□ 0.54
NFIC-202ENST00000395111 SLC16A2P36021 539 aa18.44■□□□□ 0.54
NFIC-202ENST00000395111 MTMR2Q13614 643 aa18.44■□□□□ 0.54
NFIC-202ENST00000395111 CHADLQ6NUI6 762 aa18.44■□□□□ 0.54
NFIC-202ENST00000395111 ARMC9Q7Z3E5 817 aa18.44■□□□□ 0.54
NFIC-202ENST00000395111 TMX2Q9Y320 296 aa18.44■□□□□ 0.54
NFIC-202ENST00000395111 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
NFIC-202ENST00000395111 NID2Q14112 1375 aa18.44■□□□□ 0.54
NFIC-202ENST00000395111 PALM3A6NDB9 673 aaPredicted RBP18.43■□□□□ 0.54
NFIC-202ENST00000395111 AKAP17AQ02040 695 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms