RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 PKN1Q16512 942 aa14.55□□□□□ -0.08
SSH2-203ENST00000394848 KIF4BQ2VIQ3 1234 aa14.55□□□□□ -0.08
SSH2-203ENST00000394848 TBC1D10BQ4KMP7 808 aaPredicted RBP14.55□□□□□ -0.08
SSH2-203ENST00000394848 CCDC183Q5T5S1 534 aa14.55□□□□□ -0.08
SSH2-203ENST00000394848 RBM26Q5T8P6 1007 aaKnown RBP14.55□□□□□ -0.08
SSH2-203ENST00000394848 ZFPM1Q8IX07 1006 aa14.55□□□□□ -0.08
SSH2-203ENST00000394848 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.55□□□□□ -0.08
SSH2-203ENST00000394848 DHX36Q9H2U1 1008 aaKnown RBP14.55□□□□□ -0.08
SSH2-203ENST00000394848 LETM1O95202 739 aaPredicted RBP14.54□□□□□ -0.08
SSH2-203ENST00000394848 XBP1P17861 261 aa14.54□□□□□ -0.08
SSH2-203ENST00000394848 HIRAP54198 1017 aaPredicted RBP14.54□□□□□ -0.08
SSH2-203ENST00000394848 TCP10Q12799 353 aa14.54□□□□□ -0.08
SSH2-203ENST00000394848 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
SSH2-203ENST00000394848 TRPM4Q8TD43 1214 aa14.54□□□□□ -0.08
SSH2-203ENST00000394848 KCNJ14Q9UNX9 436 aa14.54□□□□□ -0.08
SSH2-203ENST00000394848 NAV1Q8NEY1 1877 aa14.54□□□□□ -0.08
SSH2-203ENST00000394848 TCHHQ07283 1943 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 hCG_1642624A0A1W2PR95 340 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 MYO1BO43795 1136 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
SSH2-203ENST00000394848 VEGFAP15692 232 aaPredicted RBP14.53□□□□□ -0.08
SSH2-203ENST00000394848 EPHX2P34913 555 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 GNAQP50148 359 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 LRSAM1Q6UWE0 723 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 USP50Q70EL3 339 aaPredicted RBP14.53□□□□□ -0.08
SSH2-203ENST00000394848 CEP95Q96GE4 821 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 TAF1DQ9H5J8 278 aaPredicted RBP14.53□□□□□ -0.08
SSH2-203ENST00000394848 TDRD3Q9H7E2 651 aaKnown RBP14.53□□□□□ -0.08
SSH2-203ENST00000394848 GRPEL1Q9HAV7 217 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 POLR3EQ9NVU0 708 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 FAM198AQ9UFP1 575 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 CLIC4Q9Y696 253 aa14.53□□□□□ -0.08
SSH2-203ENST00000394848 BTBD18B2RXH4 712 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 TOP1P11387 765 aaKnown RBP14.52□□□□□ -0.08
SSH2-203ENST00000394848 XRCC6P12956 609 aaKnown RBP eCLIP14.52□□□□□ -0.08
SSH2-203ENST00000394848 LIG1P18858 919 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 NOVP48745 357 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 GRM4Q14833 912 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 DIS3L2Q8IYB7 885 aaKnown RBP14.52□□□□□ -0.08
SSH2-203ENST00000394848 LINC00301Q8NCQ3 95 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 BICD2Q8TD16 824 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 EHD4Q9H223 541 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 FOXP1Q9H334 677 aaPredicted RBP14.52□□□□□ -0.08
SSH2-203ENST00000394848 WDR90Q96KV7 1748 aa14.52□□□□□ -0.08
SSH2-203ENST00000394848 YEATS4O95619 227 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 ME1P48163 572 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 STK38Q15208 465 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 FKBP1CQ5VVH2 108 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 ANO1Q5XXA6 986 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 PNMA8AQ86V59 439 aaPredicted RBP14.52□□□□□ -0.09
SSH2-203ENST00000394848 NOSTRINQ8IVI9 506 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 ZSCAN29Q8IWY8 852 aaPredicted RBP14.52□□□□□ -0.09
SSH2-203ENST00000394848 STAG2Q8N3U4 1231 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 RRAGCQ9HB90 399 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 MTMR4Q9NYA4 1195 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 PI4KBQ9UBF8 816 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 ZNF70Q9UC06 446 aaPredicted RBP14.52□□□□□ -0.09
SSH2-203ENST00000394848 MAD2L2Q9UI95 211 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 CNTNAP5Q8WYK1 1306 aa14.52□□□□□ -0.09
SSH2-203ENST00000394848 DDTLA6NHG4 134 aaPredicted RBP14.51□□□□□ -0.09
SSH2-203ENST00000394848 AKR1B1P15121 316 aa14.51□□□□□ -0.09
SSH2-203ENST00000394848 SHMT1P34896 483 aa14.51□□□□□ -0.09
SSH2-203ENST00000394848 NASPP49321 788 aaPredicted RBP14.51□□□□□ -0.09
SSH2-203ENST00000394848 SF3A1Q15459 793 aaKnown RBP14.51□□□□□ -0.09
SSH2-203ENST00000394848 KCNG4Q8TDN1 519 aa14.51□□□□□ -0.09
SSH2-203ENST00000394848 ZC3H15Q8WU90 426 aaKnown RBP14.51□□□□□ -0.09
SSH2-203ENST00000394848 VPS54Q9P1Q0 977 aa14.51□□□□□ -0.09
SSH2-203ENST00000394848 MTMR7Q9Y216 660 aa14.51□□□□□ -0.09
SSH2-203ENST00000394848 DDX60LQ5H9U9 1706 aaKnown RBP14.5□□□□□ -0.09
SSH2-203ENST00000394848 PALM3A6NDB9 673 aaPredicted RBP14.5□□□□□ -0.09
SSH2-203ENST00000394848 SPTLC2O15270 562 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 ENTPD3O75355 529 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 FOXP4Q8IVH2 680 aaPredicted RBP14.5□□□□□ -0.09
SSH2-203ENST00000394848 CCDC17Q96LX7 622 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 LZTS2Q9BRK4 669 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 PHF20Q9BVI0 1012 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 PGAP2Q9UHJ9 254 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 PCDHA7Q9UN72 937 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 CDK5RAP2Q96SN8 1893 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 IGKV6D-41A0A0C4DH26 115 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 CLRN2A0PK11 232 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 SCG2P13521 617 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 PFKFB3Q16875 520 aaPredicted RBP14.5□□□□□ -0.09
SSH2-203ENST00000394848 SH3BP5LQ7L8J4 393 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 CCAR1Q8IX12 1150 aaKnown RBP14.5□□□□□ -0.09
SSH2-203ENST00000394848 PIBF1Q8WXW3 757 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 NMRK2Q9NPI5 230 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 DACT1Q9NYF0 836 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 TMOD2Q9NZR1 351 aa14.5□□□□□ -0.09
SSH2-203ENST00000394848 ASTN2O75129 1339 aaPredicted RBP14.49□□□□□ -0.09
SSH2-203ENST00000394848 PLIN4Q96Q06 1357 aa14.49□□□□□ -0.09
SSH2-203ENST00000394848 KLRF2D3W0D1 207 aa14.49□□□□□ -0.09
SSH2-203ENST00000394848 MPHOSPH10O00566 681 aaKnown RBP14.49□□□□□ -0.09
SSH2-203ENST00000394848 PARP1P09874 1014 aaKnown RBP14.49□□□□□ -0.09
SSH2-203ENST00000394848 NR5A1Q13285 461 aa14.49□□□□□ -0.09
SSH2-203ENST00000394848 SLC39A14Q15043 492 aa14.49□□□□□ -0.09
SSH2-203ENST00000394848 ADALQ6DHV7 355 aa14.49□□□□□ -0.09
SSH2-203ENST00000394848 OXER1Q8TDS5 423 aa14.49□□□□□ -0.09
SSH2-203ENST00000394848 ZNF526Q8TF50 670 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms