RNA–Protein interactions for RNA: ENST00000393868.6

SUCLG1-201, Transcript of succinate-CoA ligase alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLG1, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-201ENST00000393868 CHL1O00533 1208 aa7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 RNMTO43148 476 aaKnown RBP7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 EIF4EBP3O60516 100 aaPredicted RBP7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 C19orf57Q0VDD7 668 aa7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 TWISTNBQ3B726 338 aaPredicted RBP7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 ERICH6BQ5W0A0 696 aa7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 SSH1Q8WYL5 1049 aa7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 KLHDC7BQ96G42 594 aa7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 C8orf37Q96NL8 207 aa7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 WDR17Q8IZU2 1322 aa7.77□□□□□ -1.17
SUCLG1-201ENST00000393868 PNMA6FA0A0J9YX94 578 aa7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 F8W735 103 aaPredicted RBP7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 VAMP4O75379 141 aa7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 CT47B1P0C2W7 299 aaPredicted RBP7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 NOS3P29474 1203 aa7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 TEFQ10587 303 aa7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 TAF7Q15545 349 aaPredicted RBP7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 ENOX2Q16206 610 aaKnown RBP7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 KRT24Q2M2I5 525 aa7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 DDX54Q8TDD1 881 aaKnown RBP7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 SOX17Q9H6I2 414 aaPredicted RBP7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 TPSG1Q9NRR2 321 aa7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 CCDC9Q9Y3X0 531 aaKnown RBP7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 RGPD1P0DJD0 1748 aa7.76□□□□□ -1.17
SUCLG1-201ENST00000393868 TM4SF5O14894 197 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 IL2RBP14784 551 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 GRIA4P48058 902 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 FMR1Q06787 632 aaKnown RBP eCLIP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 DUOXA2Q1HG44 320 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 PRPF40BQ6NWY9 871 aaKnown RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 ACAD11Q709F0 780 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 IFNL2Q8IZJ0 200 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 ZCRB1Q8TBF4 217 aaKnown RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 PANK1Q8TE04 598 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 CLEC4MQ9H2X3 399 aaPredicted RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 KCNK4Q9NYG8 393 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 NOB1Q9ULX3 412 aaKnown RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 PHRF1Q9P1Y6 1649 aaKnown RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 CRB1P82279 1406 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 NHSL1Q5SYE7 1610 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 BTBD11A6QL63 1104 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 SOX1O00570 391 aaPredicted RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 FURINP09958 794 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 ESRRAP11474 423 aaPredicted RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 PHKG2P15735 406 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 MAPK8P45983 427 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 PCDH1Q08174 1060 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 SPRED3Q2MJR0 410 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 ZKSCAN2Q63HK3 967 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 EPS8L3Q8TE67 593 aaKnown RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 CCDC136Q96JN2 1154 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 TNNQ9UQP3 1299 aa7.75□□□□□ -1.17
SUCLG1-201ENST00000393868 CAMTA1Q9Y6Y1 1673 aa7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 K7ELQ4 463 aaPredicted RBP7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 DDX3YO15523 660 aaKnown RBP7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 KCNQ3O43525 872 aa7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 ADAM11O75078 769 aa7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 NLRP12P59046 1061 aa7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 ATP2B2Q01814 1243 aa7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 ALDH1L2Q3SY69 923 aa7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 FTSJ3Q8IY81 847 aaKnown RBP7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 FBF1Q8TES7 1133 aa7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 SSBP4Q9BWG4 385 aaPredicted RBP7.74□□□□□ -1.17
SUCLG1-201ENST00000393868 IPO8O15397 1037 aaKnown RBP7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 CYP27B1O15528 508 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 ALX3O95076 343 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 WISP1O95388 367 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 HSP90AB1P08238 724 aaKnown RBP7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 EIF2S2P20042 333 aaKnown RBP7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 ITPKAP23677 461 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 GRM2Q14416 872 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 Q6ZS46 218 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 DZIP1LQ8IYY4 767 aaKnown RBP7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 AGGF1Q8N302 714 aaeCLIP7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 UBASH3BQ8TF42 649 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 TP53INP1Q96A56 240 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 CEP41Q9BYV8 373 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 ABCB6Q9NP58 842 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 COL5A2P05997 1499 aaPredicted RBP7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 MEGF6O75095 1541 aa7.73□□□□□ -1.17
SUCLG1-201ENST00000393868 EP400Q96L91 3159 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 TMEM238LA0A1B0GVL6 79 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 GLB1P16278 677 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 GSTM4Q03013 218 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 RSPO4Q2I0M5 234 aaPredicted RBP7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 HGSNATQ68CP4 663 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 ALG1LQ6GMV1 187 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 KIAA1211Q6ZU35 1233 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 MEGF10Q96KG7 1140 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 ZNF576Q9H609 170 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 BABAM1Q9NWV8 329 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 NCAPD2Q15021 1401 aa7.72□□□□□ -1.17
SUCLG1-201ENST00000393868 COL18A1P39060 1754 aa7.71□□□□□ -1.17
SUCLG1-201ENST00000393868 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.18
SUCLG1-201ENST00000393868 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.18
SUCLG1-201ENST00000393868 EXOC5O00471 708 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms