RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 FBXW10Q5XX13 1052 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 TEX9Q8N6V9 391 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 HDAC11Q96DB2 347 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 EIF3CQ99613 913 aaKnown RBP3.6□□□□□ -1.83
PHF3-202ENST00000393387 C7orf25Q9BPX7 421 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 SBNO1A3KN83 1393 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 SLCO1A2P46721 670 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 STAT2P52630 851 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 TWISTNBQ3B726 338 aaPredicted RBP3.6□□□□□ -1.83
PHF3-202ENST00000393387 SULT1C3Q6IMI6 304 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 RUFY4Q6ZNE9 571 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 TOM1L2Q6ZVM7 507 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 RAPH1Q70E73 1250 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 MICU3Q86XE3 530 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 TMEM87AQ8NBN3 555 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 NOP53Q9NZM5 478 aaKnown RBP3.6□□□□□ -1.83
PHF3-202ENST00000393387 TMOD4Q9NZQ9 345 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 GGT7Q9UJ14 662 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 ANGPTL2Q9UKU9 493 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 BAG5Q9UL15 447 aa3.6□□□□□ -1.83
PHF3-202ENST00000393387 COPG1Q9Y678 874 aaKnown RBP3.6□□□□□ -1.83
PHF3-202ENST00000393387 EVC2Q86UK5 1308 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 SCAPERQ9BY12 1400 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 CCDC151A5D8V7 595 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 TMEM191CA6NGB0 347 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 GSTA1P08263 222 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 GSTA2P09210 222 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 TMEM191BP0C7N4 346 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 NCF2P19878 526 aaPredicted RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 VCPP55072 806 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 MRPS25P82663 173 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 MRPS35P82673 323 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 LONRF2Q1L5Z9 754 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 CCDC103Q8IW40 242 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 RNF169Q8NCN4 708 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 B4GALNT2Q8NHY0 566 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 ZCWPW1Q9H0M4 648 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 ABT1Q9ULW3 272 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 PTPN22Q9Y2R2 807 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 ABCC8Q09428 1581 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 PSMD7P51665 324 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 RPS6P62753 249 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 C2orf54Q08AI8 447 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 GRSF1Q12849 480 aaKnown RBP eCLIP3.59□□□□□ -1.83
PHF3-202ENST00000393387 PAK2Q13177 524 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 MTX1Q13505 466 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 CCDC142Q17RM4 750 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 TMEM154Q6P9G4 183 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 SLC30A9Q6PML9 568 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 PRR23CQ6ZRP0 262 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 IGSF22Q8N9C0 903 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 FAM133AQ8N9E0 248 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 LRRC8CQ8TDW0 803 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 LRRC27Q9C0I9 530 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 PARVBQ9HBI1 364 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 DNAJC17Q9NVM6 304 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 CEP126Q9P2H0 1117 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 PNMA2Q9UL42 364 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 ZNF215Q9UL58 517 aaPredicted RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 HYOU1Q9Y4L1 999 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 POC1B-GALNT4F8VUJ3 575 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 TRIM66O15016 1216 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 NBPF7P0C2Y1 421 aaPredicted RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 GYS1P13807 737 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 SERPINB3P29508 390 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 KIF11P52732 1056 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 ADKP55263 362 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 TMED2Q15363 201 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 MDH1BQ5I0G3 518 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 NAA35Q5VZE5 725 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 PALM2Q8IXS6 379 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 TDRD7Q8NHU6 1098 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 CDC26Q8NHZ8 85 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 UBE2OQ9C0C9 1292 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 CCDC8Q9H0W5 538 aaPredicted RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 COG4Q9H9E3 785 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 OLFML3Q9NRN5 406 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 TBK1Q9UHD2 729 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 MOSPD1Q9UJG1 213 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 FBXL5Q9UKA1 691 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 RB1CC1Q8TDY2 1594 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 IQCA1LA6NCM1 817 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 KRT16P08779 473 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 KITP10721 976 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 EIF2B2P49770 351 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 EAPPQ56P03 285 aaPredicted RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 TMTC3Q6ZXV5 915 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 KRT74Q7RTS7 529 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 PARP9Q8IXQ6 854 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 TRIM58Q8NG06 486 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 MAML1Q92585 1016 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 KRT12Q99456 494 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 DHX36Q9H2U1 1008 aaKnown RBP3.59□□□□□ -1.83
PHF3-202ENST00000393387 LRP2BPQ9P2M1 347 aa3.59□□□□□ -1.83
PHF3-202ENST00000393387 ACTN4O43707 911 aaKnown RBP3.59□□□□□ -1.84
PHF3-202ENST00000393387 CHGBP05060 677 aa3.59□□□□□ -1.84
PHF3-202ENST00000393387 ATP2B4P23634 1241 aa3.59□□□□□ -1.84
PHF3-202ENST00000393387 ATXN3P54252 364 aaPredicted RBP3.59□□□□□ -1.84
PHF3-202ENST00000393387 RAD23BP54727 409 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms