RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PDHXO00330 501 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
UBBP1-201ENST00000392399 MAP3K13O43283 966 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 TRPA1O75762 1119 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 HSPA1AP0DMV8 641 aaKnown RBP7.98□□□□□ -1.13
UBBP1-201ENST00000392399 HSPA1BP0DMV9 641 aaKnown RBP7.98□□□□□ -1.13
UBBP1-201ENST00000392399 EEF2P13639 858 aaKnown RBP7.98□□□□□ -1.13
UBBP1-201ENST00000392399 ZKSCAN1P17029 563 aaPredicted RBP7.98□□□□□ -1.13
UBBP1-201ENST00000392399 OSBPP22059 807 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 NOVP48745 357 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 HMGCS2P54868 508 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 MTMR2Q13614 643 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 SHROOM1Q2M3G4 852 aaPredicted RBP7.98□□□□□ -1.13
UBBP1-201ENST00000392399 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 FAM47AQ5JRC9 791 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 RRP12Q5JTH9 1297 aaKnown RBP7.98□□□□□ -1.13
UBBP1-201ENST00000392399 GPAT2Q6NUI2 795 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 GADL1Q6ZQY3 521 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 DGKHQ86XP1 1220 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 TBC1D10CQ8IV04 446 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 FAM43AQ8N2R8 423 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 NCOA7Q8NI08 942 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 ACER1Q8TDN7 264 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 CEP95Q96GE4 821 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 MTA3Q9BTC8 594 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 NBPF3Q9H094 633 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 VCPKMTQ9H867 229 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 ZFYVE28Q9HCC9 887 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 GOPCQ9HD26 462 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 INCENPQ9NQS7 918 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.98□□□□□ -1.13
UBBP1-201ENST00000392399 CLIP2Q9UDT6 1046 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 THSD7BQ9C0I4 1608 aa7.98□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L15C9J2P7 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L13C9JLJ4 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L11C9JVI0 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L18D6R9N7 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L22D6RA61 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L17D6RBQ6 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L19D6RCP7 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L20D6RJB6 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 E7EWF7 191 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 F5H6K3 240 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 SLC27A2O14975 620 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 CTCFP49711 727 aaPredicted RBP7.97□□□□□ -1.13
UBBP1-201ENST00000392399 ATP2B2Q01814 1243 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 KLRC3Q07444 240 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 USP17L24Q0WX57 530 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 KRT32Q14532 448 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 TAF1CQ15572 869 aaPredicted RBP7.97□□□□□ -1.13
UBBP1-201ENST00000392399 CREB3L3Q68CJ9 461 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 RALYLQ86SE5 291 aaKnown RBP7.97□□□□□ -1.13
UBBP1-201ENST00000392399 GTF3C2Q8WUA4 911 aaPredicted RBP7.97□□□□□ -1.13
UBBP1-201ENST00000392399 ANKS1AQ92625 1134 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 PARK7Q99497 189 aaKnown RBP7.97□□□□□ -1.13
UBBP1-201ENST00000392399 IL17RBQ9NRM6 502 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 HOXC10Q9NYD6 342 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 ZSWIM5Q9P217 1185 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 STX8Q9UNK0 236 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 TACC3Q9Y6A5 838 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 LAMB1P07942 1786 aa7.97□□□□□ -1.13
UBBP1-201ENST00000392399 B4E1Z4 1266 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 WDR46O15213 610 aaKnown RBP7.96□□□□□ -1.14
UBBP1-201ENST00000392399 TLR2O60603 784 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 KDM4AO75164 1064 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 HMGB1P09429 215 aaKnown RBP7.96□□□□□ -1.14
UBBP1-201ENST00000392399 TOP1P11387 765 aaKnown RBP7.96□□□□□ -1.14
UBBP1-201ENST00000392399 VCAM1P19320 739 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 HSPA4P34932 840 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 GCLCP48506 637 aaPredicted RBP7.96□□□□□ -1.14
UBBP1-201ENST00000392399 IRX3P78415 501 aaPredicted RBP7.96□□□□□ -1.14
UBBP1-201ENST00000392399 SART3Q15020 963 aaKnown RBP7.96□□□□□ -1.14
UBBP1-201ENST00000392399 ARHGEF6Q15052 776 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 CATSPERGQ6ZRH7 1159 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 TMTC2Q8N394 836 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 GMCL1P1Q8NEA9 526 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 KCNB2Q92953 911 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 FAM212AQ96EL1 285 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 ZSCAN10Q96SZ4 725 aaPredicted RBP7.96□□□□□ -1.14
UBBP1-201ENST00000392399 UBAC1Q9BSL1 405 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 USP26Q9BXU7 913 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 NEDD4P46934 1319 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 PHIPQ8WWQ0 1821 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 ATAD5Q96QE3 1844 aa7.96□□□□□ -1.14
UBBP1-201ENST00000392399 MYH8P13535 1937 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 ERICH2A1L162 156 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 GPR25O00155 361 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 FOXN1O15353 648 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 TBC1D8O95759 1140 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 C7P10643 843 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 MCCP23508 829 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 MCM5P33992 734 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 CRHR2Q13324 411 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 COG2Q14746 738 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 ZYXQ15942 572 aaKnown RBP7.95□□□□□ -1.14
UBBP1-201ENST00000392399 TREML2Q5T2D2 321 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 RCSD1Q6JBY9 416 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 C17orf99Q6UX52 265 aa7.95□□□□□ -1.14
UBBP1-201ENST00000392399 LBX2Q6XYB7 198 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms