RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 TTLL6Q8N841 843 aa18.6■□□□□ 0.57
SNX9-201ENST00000392185 RNF26Q9BY78 433 aaPredicted RBP18.6■□□□□ 0.57
SNX9-201ENST00000392185 PSTPIP2Q9H939 334 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 CC2D2BQ6DHV5 1058 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 CDC25AP30304 524 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 TECP42680 631 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 SLC27A3Q5K4L6 730 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 CABP7Q86V35 215 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 EEF2KMTQ96G04 330 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
SNX9-201ENST00000392185 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 REREQ9P2R6 1566 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 PCDHA1Q9Y5I3 950 aa18.59■□□□□ 0.57
SNX9-201ENST00000392185 PLEKHA8P1O95397 391 aa18.58■□□□□ 0.57
SNX9-201ENST00000392185 CHRNA5P30532 468 aa18.58■□□□□ 0.57
SNX9-201ENST00000392185 MIGA2Q7L4E1 593 aa18.58■□□□□ 0.57
SNX9-201ENST00000392185 CDK8P49336 464 aa18.58■□□□□ 0.56
SNX9-201ENST00000392185 FANCCQ00597 558 aa18.58■□□□□ 0.56
SNX9-201ENST00000392185 HS2ST1Q7LGA3 356 aa18.58■□□□□ 0.56
SNX9-201ENST00000392185 PGBD1Q96JS3 809 aa18.58■□□□□ 0.56
SNX9-201ENST00000392185 UTYO14607 1347 aa18.58■□□□□ 0.56
SNX9-201ENST00000392185 SF3B3Q15393 1217 aaKnown RBP18.58■□□□□ 0.56
SNX9-201ENST00000392185 HERC4Q5GLZ8 1057 aaPredicted RBP18.58■□□□□ 0.56
SNX9-201ENST00000392185 CEP135Q66GS9 1140 aa18.58■□□□□ 0.56
SNX9-201ENST00000392185 DRC1Q96MC2 740 aa18.58■□□□□ 0.56
SNX9-201ENST00000392185 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
SNX9-201ENST00000392185 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.56
SNX9-201ENST00000392185 CCDC93Q567U6 631 aa18.57■□□□□ 0.56
SNX9-201ENST00000392185 EAPPQ56P03 285 aaPredicted RBP18.57■□□□□ 0.56
SNX9-201ENST00000392185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.57■□□□□ 0.561e-6■■■□□ 15.2
SNX9-201ENST00000392185 FMNL1O95466 1100 aaPredicted RBP18.57■□□□□ 0.56
SNX9-201ENST00000392185 ALAS1P13196 640 aa18.57■□□□□ 0.56
SNX9-201ENST00000392185 CMA1P23946 247 aa18.57■□□□□ 0.56
SNX9-201ENST00000392185 TNFAIP1Q13829 316 aa18.57■□□□□ 0.56
SNX9-201ENST00000392185 NLRP12P59046 1061 aa18.57■□□□□ 0.56
SNX9-201ENST00000392185 COA7Q96BR5 231 aa18.57■□□□□ 0.56
SNX9-201ENST00000392185 ZNF609O15014 1411 aa18.57■□□□□ 0.56
SNX9-201ENST00000392185 A0A0G2JLW4 131 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 RC3H1Q5TC82 1133 aaKnown RBP18.56■□□□□ 0.56
SNX9-201ENST00000392185 CCDC65Q8IXS2 484 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNX9-201ENST00000392185 RTEL1Q9NZ71 1219 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 FAM193AP78312 1265 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 SLC39A14Q15043 492 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 KARSQ15046 597 aaKnown RBP18.56■□□□□ 0.56
SNX9-201ENST00000392185 AXDND1Q5T1B0 1012 aaPredicted RBP18.56■□□□□ 0.56
SNX9-201ENST00000392185 CHURC1Q8WUH1 139 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 CCDC17Q96LX7 622 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 TDRD3Q9H7E2 651 aaKnown RBP18.56■□□□□ 0.56
SNX9-201ENST00000392185 PIGSQ96S52 555 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 PUF60Q9UHX1 559 aaKnown RBP18.56■□□□□ 0.56
SNX9-201ENST00000392185 BICDL2A1A5D9 508 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 GPR162Q16538 588 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 CSGALNACT2Q8N6G5 542 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 MLKLQ8NB16 471 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
SNX9-201ENST00000392185 CLCN1P35523 988 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 TBC1D8BQ0IIM8 1120 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 RESTQ13127 1097 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 PRR16Q569H4 304 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 GLT8D2Q9H1C3 349 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 GOPCQ9HD26 462 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
SNX9-201ENST00000392185 TMCO5BA8MYB1 307 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 MB21D2Q8IYB1 491 aaPredicted RBP18.55■□□□□ 0.56
SNX9-201ENST00000392185 KIF20BQ96Q89 1820 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 AOC3Q16853 763 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 NEK8Q86SG6 692 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 FBXO11Q86XK2 927 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 NELFCDQ8IXH7 590 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 CENPHQ9H3R5 247 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 LZTFL1Q9NQ48 299 aa18.55■□□□□ 0.56
SNX9-201ENST00000392185 TTLL1O95922 423 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 ZNF75DP51815 510 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 DCAF17Q5H9S7 520 aaPredicted RBP18.54■□□□□ 0.56
SNX9-201ENST00000392185 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 LINC00301Q8NCQ3 95 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.54■□□□□ 0.56
SNX9-201ENST00000392185 ZDHHC9Q9Y397 364 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 PCDHA5Q9Y5H7 936 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 V9GYY5 206 aaPredicted RBP18.54■□□□□ 0.56
SNX9-201ENST00000392185 MYOM1P52179 1685 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 KRT13P13646 458 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 MAP7D2Q96T17 732 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 RCOR1Q9UKL0 485 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 MACROD2A1Z1Q3 448 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 HAUS3Q68CZ6 603 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 MTERF4Q7Z6M4 381 aaKnown RBP18.54■□□□□ 0.56
SNX9-201ENST00000392185 STAG1Q8WVM7 1258 aa18.54■□□□□ 0.56
SNX9-201ENST00000392185 MPHOSPH6Q99547 160 aaKnown RBP18.54■□□□□ 0.56
SNX9-201ENST00000392185 JADE2Q9NQC1 790 aa18.53■□□□□ 0.56
SNX9-201ENST00000392185 TAB2Q9NYJ8 693 aa18.53■□□□□ 0.56
SNX9-201ENST00000392185 SYNRGQ9UMZ2 1314 aa18.53■□□□□ 0.56
SNX9-201ENST00000392185 PCDHA12Q9UN75 941 aa18.53■□□□□ 0.56
SNX9-201ENST00000392185 LUC7L2Q9Y383 392 aaKnown RBP18.53■□□□□ 0.56
SNX9-201ENST00000392185 ZBED4O75132 1171 aa18.53■□□□□ 0.56
SNX9-201ENST00000392185 ENAHQ8N8S7 591 aaPredicted RBP18.53■□□□□ 0.56
SNX9-201ENST00000392185 CSRNP2Q9H175 543 aa18.53■□□□□ 0.56
SNX9-201ENST00000392185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.53■□□□□ 0.56
SNX9-201ENST00000392185 IGSF22Q8N9C0 903 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms