RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 BAZ2BQ9UIF8 2168 aaKnown RBP13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 MYH4Q9Y623 1939 aa13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 DDTLA6NHG4 134 aaPredicted RBP13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 SPTLC2O15270 562 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 TCP10Q12799 353 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 SLC39A14Q15043 492 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 ADALQ6DHV7 355 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 SH3BP5LQ7L8J4 393 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 PCDHA7Q9UN72 937 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 A0A1W2PQ27 194 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 A0A1W2PQ64 194 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 A0A1W2PQD8 194 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 PTGER2P43116 358 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 METTL16Q86W50 562 aaKnown RBP13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 DNAJC18Q9H819 358 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 DACT1Q9NYF0 836 aa13.2□□□□□ -0.3
SMARCAL1-203ENST00000392128 UTRNP46939 3433 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 TTLL1O95922 423 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 PARP1P09874 1014 aaKnown RBP13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 KRT2P35908 639 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 SPZ1Q9BXG8 430 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 NUP62CLQ9H1M0 184 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 TSPY26PQ9H489 355 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 PPP1R1BQ9UD71 204 aaPredicted RBP13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 PPP6R2O75170 966 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 NR1I2O75469 434 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 NR5A1Q13285 461 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 PTPAQ15257 358 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 CLSTN2Q9H4D0 955 aa13.19□□□□□ -0.3
SMARCAL1-203ENST00000392128 SRCAPQ6ZRS2 3230 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 LTBP3Q9NS15 1303 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 NFKBIEO00221 500 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 CXCL9Q07325 125 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 DLGAP5Q15398 846 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 NPY5RQ15761 445 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 TATDN1Q6P1N9 297 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 FAM177A1Q8N128 213 aaPredicted RBP13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 JMYQ8N9B5 988 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 TMOD2Q9NZR1 351 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 KLRF2D3W0D1 207 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 CYTH3O43739 400 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 TOB1P50616 345 aaPredicted RBP13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 SLC35G1Q2M3R5 365 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 RBM43Q6ZSC3 357 aaKnown RBP13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
SMARCAL1-203ENST00000392128 PDHBP11177 359 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 MMP14P50281 582 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 FAM160A1Q05DH4 1040 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 MAP3K11Q16584 847 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 ENGASEQ8NFI3 743 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 TRIM34Q9BYJ4 488 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 TNMDQ9H2S6 317 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 CALML3P27482 149 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 AXDND1Q5T1B0 1012 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 FKBP1CQ5VVH2 108 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 USP17L2Q6R6M4 530 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 ZNF70Q9UC06 446 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
SMARCAL1-203ENST00000392128 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
SMARCAL1-203ENST00000392128 MPHOSPH10O00566 681 aaKnown RBP13.16□□□□□ -0.3
SMARCAL1-203ENST00000392128 GOLGA8HP0CJ92 632 aa13.16□□□□□ -0.3
SMARCAL1-203ENST00000392128 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
SMARCAL1-203ENST00000392128 PANK2Q9BZ23 570 aa13.16□□□□□ -0.3
SMARCAL1-203ENST00000392128 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
SMARCAL1-203ENST00000392128 MORC2Q9Y6X9 1032 aaPredicted RBP13.16□□□□□ -0.3
SMARCAL1-203ENST00000392128 USP17L5A8MUK1 530 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms