RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ZSWIM8A7E2V4 1837 aa15.07■□□□□ 0
GGPS1-203ENST00000391855 WDR46O15213 610 aaKnown RBP15.07■□□□□ 0
GGPS1-203ENST00000391855 FOXP2O15409 715 aa15.07■□□□□ 0
GGPS1-203ENST00000391855 CTGFP29279 349 aa15.07■□□□□ 0
GGPS1-203ENST00000391855 SLC9C1Q4G0N8 1177 aa15.07■□□□□ 0
GGPS1-203ENST00000391855 COA7Q96BR5 231 aa15.07■□□□□ 0
GGPS1-203ENST00000391855 RPAP3Q9H6T3 665 aaPredicted RBP15.07■□□□□ 0
GGPS1-203ENST00000391855 GOPCQ9HD26 462 aa15.07■□□□□ 0
GGPS1-203ENST00000391855 HSPD1P10809 573 aaKnown RBP15.06■□□□□ 0
GGPS1-203ENST00000391855 EEF2P13639 858 aaKnown RBP15.06■□□□□ 0
GGPS1-203ENST00000391855 VPS53Q5VIR6 699 aa15.06■□□□□ 0
GGPS1-203ENST00000391855 CENPQQ7L2Z9 268 aaPredicted RBP15.06■□□□□ 0
GGPS1-203ENST00000391855 GPRC5AQ8NFJ5 357 aa15.06■□□□□ 0
GGPS1-203ENST00000391855 RAET1EQ8TD07 263 aa15.06■□□□□ 0
GGPS1-203ENST00000391855 NYAP2Q9P242 653 aa15.06■□□□□ 0
GGPS1-203ENST00000391855 RABGAP1Q9Y3P9 1069 aa15.06■□□□□ 0
GGPS1-203ENST00000391855 RAD50Q92878 1312 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 IGKV6D-41A0A0C4DH26 115 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 TSPY3P0CV98 308 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 TSPY8P0CW00 308 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 PCP11498 1178 aaKnown RBP15.05■□□□□ -0
GGPS1-203ENST00000391855 NT5C2P49902 561 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 CCNA1P78396 465 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 ATP2B2Q01814 1243 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 ZNF589Q86UQ0 364 aaPredicted RBP15.05■□□□□ -0
GGPS1-203ENST00000391855 CLEC10AQ8IUN9 316 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 SIAH1Q8IUQ4 282 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 STK11IPQ8N1F8 1099 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 NEDD1Q8NHV4 660 aa15.05■□□□□ -0
GGPS1-203ENST00000391855 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.05■□□□□ -0
GGPS1-203ENST00000391855 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.05■□□□□ -0
GGPS1-203ENST00000391855 SPDYE16A6NNV3 312 aaPredicted RBP15.04■□□□□ -0
GGPS1-203ENST00000391855 PRDM1O75626 825 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 FGAP02671 866 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 GSPT1P15170 499 aaKnown RBP15.04■□□□□ -0
GGPS1-203ENST00000391855 MAPK4P31152 587 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 RGS19P49795 217 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 ERVK-9P63128 1117 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 ERVK-24P63145 666 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 PRKCZQ05513 592 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 IRF5Q13568 498 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 COG2Q14746 738 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 CWC27Q6UX04 472 aaKnown RBP15.04■□□□□ -0
GGPS1-203ENST00000391855 SLAIN1Q8ND83 568 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 TANGO6Q9C0B7 1094 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 HOXC10Q9NYD6 342 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
GGPS1-203ENST00000391855 ORC4O43929 436 aa15.03■□□□□ -0
GGPS1-203ENST00000391855 NEFLP07196 543 aa15.03■□□□□ -0
GGPS1-203ENST00000391855 CCAR1Q8IX12 1150 aaKnown RBP15.03■□□□□ -0
GGPS1-203ENST00000391855 MB21D1Q8N884 522 aa15.03■□□□□ -0
GGPS1-203ENST00000391855 PXYLP1Q8TE99 480 aa15.03■□□□□ -0
GGPS1-203ENST00000391855 SOCS4Q8WXH5 440 aa15.03■□□□□ -0
GGPS1-203ENST00000391855 ZNF333Q96JL9 665 aa15.03■□□□□ -0
GGPS1-203ENST00000391855 PAGR1Q9BTK6 254 aa15.03■□□□□ -0
GGPS1-203ENST00000391855 RBBP6Q7Z6E9 1792 aaKnown RBP15.03■□□□□ -0
GGPS1-203ENST00000391855 A0A0G2JMZ2 1700 aa15.03■□□□□ -0
GGPS1-203ENST00000391855 ECM2O94769 699 aaPredicted RBP15.02■□□□□ -0
GGPS1-203ENST00000391855 TTLL1O95922 423 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 FGRP09769 529 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 GRK4P32298 578 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 FLT3LGP49771 235 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 RUFY2Q8WXA3 655 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 MKL1Q969V6 931 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 CEP95Q96GE4 821 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 DSCC1Q9BVC3 393 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 RNF41Q9H4P4 317 aaPredicted RBP15.02■□□□□ -0
GGPS1-203ENST00000391855 TXNRD2Q9NNW7 524 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 MTMR4Q9NYA4 1195 aa15.02■□□□□ -0
GGPS1-203ENST00000391855 TSPY2A6NKD2 308 aa15.01□□□□□ -0.01
GGPS1-203ENST00000391855 FLOT1O75955 427 aa15.01□□□□□ -0.01
GGPS1-203ENST00000391855 SOX10P56693 466 aa15.01□□□□□ -0.01
GGPS1-203ENST00000391855 UBXN2AP68543 259 aa15.01□□□□□ -0.01
GGPS1-203ENST00000391855 TFAP4Q01664 338 aa15.01□□□□□ -0.01
GGPS1-203ENST00000391855 CTDSPL2Q05D32 466 aa15.01□□□□□ -0.01
GGPS1-203ENST00000391855 SPICE1Q8N0Z3 855 aa15.01□□□□□ -0.01
GGPS1-203ENST00000391855 LAMA4Q16363 1823 aa15.01□□□□□ -0.01
GGPS1-203ENST00000391855 GMCL1P1Q8NEA9 526 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 TMEM106CQ9BVX2 250 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 CWC22Q9HCG8 908 aaKnown RBP15□□□□□ -0.01
GGPS1-203ENST00000391855 CLIP2Q9UDT6 1046 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 CTNNA3Q9UI47 895 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 GABRQQ9UN88 632 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 MYH4Q9Y623 1939 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 F5H6K3 240 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 ADCY3O60266 1144 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 CNMDO75829 334 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 KLRC3Q07444 240 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 FAM47AQ5JRC9 791 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 KIAA1755Q5JYT7 1200 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 TRMT44Q8IYL2 757 aaKnown RBP15□□□□□ -0.01
GGPS1-203ENST00000391855 SHCBP1Q8NEM2 672 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 SH3TC2Q8TF17 1288 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 STAG1Q8WVM7 1258 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 NUDT12Q9BQG2 462 aa15□□□□□ -0.01
GGPS1-203ENST00000391855 PARP14Q460N5 1801 aa14.99□□□□□ -0.01
GGPS1-203ENST00000391855 RLFQ13129 1914 aa14.99□□□□□ -0.01
GGPS1-203ENST00000391855 ZNF213O14771 459 aa14.99□□□□□ -0.01
GGPS1-203ENST00000391855 RAD21O60216 631 aa14.99□□□□□ -0.01
GGPS1-203ENST00000391855 RANBP6O60518 1105 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms