RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 RBM18Q96H35 190 aaKnown RBP3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 GMCL1Q96IK5 515 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 SHDQ96IW2 340 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 KATNAL1Q9BW62 490 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 TEX13AQ9BXU3 409 aaPredicted RBP3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 PDCL3Q9H2J4 239 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 DEF6Q9H4E7 631 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 TOPORSQ9NS56 1045 aaPredicted RBP3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 SMC4Q9NTJ3 1288 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 NFKBIL1Q9UBC1 381 aaPredicted RBP3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 DKK3Q9UBP4 350 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 ZNF232Q9UNY5 417 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 MAPK8IP1Q9UQF2 711 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 PAXBP1Q9Y5B6 917 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 N6AMT1Q9Y5N5 214 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 SLC30A1Q9Y6M5 507 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 ATAD2BQ9ULI0 1458 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 KDM2BQ8NHM5 1336 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 KIF16BQ96L93 1317 aa3.9□□□□□ -1.79
TRAJ17-201ENST00000390520 SYNJ2BP-COX16A0A087WUM0 186 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 ANKRD18BA2A2Z9 1011 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 GOLGA6L3A6NEY3 463 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 ERC2O15083 957 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 GPR39O43194 453 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 RASA4O43374 803 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 NEMFO60524 1076 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 MTRF1O75570 445 aaKnown RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TIPRLO75663 272 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 B3GALNT1O75752 331 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 MICAL2O94851 1124 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 CYP11A1P05108 521 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 MMEP08473 750 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 KRT10P13645 584 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 HSPA4P34932 840 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 IREB2P48200 963 aaKnown RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 PDE6CP51160 858 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 LIMK1P53667 647 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 USP46P62068 366 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 MECOMQ03112 1051 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 G3BP1Q13283 466 aaKnown RBP eCLIP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 PABPC4Q13310 644 aaKnown RBP eCLIP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 EIF4A2Q14240 407 aaKnown RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TNIP1Q15025 636 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TAF7Q15545 349 aaPredicted RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 PPP2R5EQ16537 467 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 SHROOM1Q2M3G4 852 aaPredicted RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 ANKRD39Q53RE8 183 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TMEM67Q5HYA8 995 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 METTL24Q5JXM2 366 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 BRICD5Q6PL45 260 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 RALYLQ86SE5 291 aaKnown RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 ILDR1Q86SU0 546 aaPredicted RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TAX1BP1Q86VP1 789 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 NLRP14Q86W24 1093 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 ANKRD18AQ8IVF6 992 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 NRSN1Q8IZ57 195 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 MYOCDQ8IZQ8 938 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 BICD2Q8TD16 824 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 PARD3BQ8TEW8 1205 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 ANKRD49Q8WVL7 239 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 NACC2Q96BF6 587 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 ZNF669Q96BR6 464 aaPredicted RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 EAF1Q96JC9 268 aaPredicted RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 MYD88Q99836 296 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TCHPQ9BT92 498 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 NAA15Q9BXJ9 866 aaKnown RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 PUS7LQ9H0K6 701 aaKnown RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 LUC7LQ9NQ29 371 aaKnown RBP3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TRPV5Q9NQA5 729 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TCF7L2Q9NQB0 619 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 ABCF3Q9NUQ8 709 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 KBTBD4Q9NVX7 518 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 CEP72Q9P209 647 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 FBXL5Q9UKA1 691 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 CFAP45Q9UL16 551 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 FAM50BQ9Y247 325 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 HCN4Q9Y3Q4 1203 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 DCAF1Q9Y4B6 1507 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 TNKSO95271 1327 aa3.89□□□□□ -1.79
TRAJ17-201ENST00000390520 DNAJC25-GNG10A0A024R161 153 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 CCDC196A0A1B0GTZ2 297 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 M0R3H8 397 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 EYA2O00167 538 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 GIPC1O14908 333 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 CASQ2O14958 399 aaPredicted RBP3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 NCAM2O15394 837 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 CCP110O43303 1012 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 FRS3O43559 492 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 MAFKO60675 156 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 DKC1O60832 514 aaKnown RBP eCLIP3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 P4HA1P13674 534 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 ZKSCAN1P17029 563 aaPredicted RBP3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 VCAM1P19320 739 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 ATP6V1E1P36543 226 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 SKOR1P84550 965 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 PPFIA1Q13136 1202 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 GTF2H3Q13889 308 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 PPP2R5DQ14738 602 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 SLC14A2Q15849 920 aa3.88□□□□□ -1.79
TRAJ17-201ENST00000390520 PDCD2Q16342 344 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms