RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ADOQ96SZ5 270 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SPATA5L1Q9BVQ7 753 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ATXN3LQ9H3M9 355 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 R3HDMLQ9H3Y0 253 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 GSX1Q9H4S2 264 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SOX17Q9H6I2 414 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ZFYVE1Q9HBF4 777 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 CRTAC1Q9NQ79 661 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 JADE2Q9NQC1 790 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 PRDM5Q9NQX1 630 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SH2B1Q9NRF2 756 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 RAD18Q9NS91 495 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 MTMR4Q9NYA4 1195 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 MAPK8IP1Q9UQF2 711 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ZKSCAN5Q9Y2L8 839 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 FAN1Q9Y2M0 1017 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 REXO2Q9Y3B8 237 aaKnown RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 CHMP3Q9Y3E7 222 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 PCDHB15Q9Y5E8 787 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 PCDHA5Q9Y5H7 936 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 USP3Q9Y6I4 520 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 MROH6A6NGR9 719 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TGFBR3LH3BV60 316 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TNFRSF13BO14836 293 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KIAA0355O15063 1070 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MMP20O60882 483 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SASH3O75995 380 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 NTN1O95631 604 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 STAU1O95793 577 aaKnown RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PEX11BO96011 259 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PLA2G1BP04054 148 aaKnown RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MPOP05164 745 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CELA3AP09093 270 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZGLP1P0C6A0 271 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ACRP10323 421 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PNLIPP16233 465 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 LMNB1P20700 586 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ACRV1P26436 265 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TARSP26639 723 aaKnown RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 DNAJA1P31689 397 aaKnown RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ARL4AP40617 200 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CXCR3P49682 368 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ARSDP51689 593 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 NCKAP1LP55160 1127 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ELLP55199 621 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ERVFRD-1P60508 538 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 HNRNPUQ00839 825 aaKnown RBP eCLIP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 USP4Q13107 963 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 IKBKEQ14164 716 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 NR6A1Q15406 480 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CSPP1Q1MSJ5 1256 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CDKAL1Q5VV42 579 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SLFN13Q68D06 897 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 FBXO42Q6P3S6 717 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PP632Q6XCG6 107 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ARHGEF18Q6ZSZ5 1173 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TTLL7Q6ZT98 887 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 C18orf65Q6ZTR6 163 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 C22orf34Q6ZV56 151 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 FAM214BQ7L5A3 538 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TECPR1Q7Z6L1 1165 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 NLRX1Q86UT6 975 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CREG2Q8IUH2 290 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZDHHC17Q8IUH5 632 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SLC9A9Q8IVB4 645 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SMYD4Q8IYR2 804 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SAMD14Q8IZD0 417 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF513Q8N8E2 541 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ANKS4BQ8N8V4 417 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KRI1Q8N9T8 703 aaKnown RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 IL17DQ8TAD2 202 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 WIPF2Q8TF74 440 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TAF15Q92804 592 aaKnown RBP eCLIP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF524Q96C55 264 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 FAM89AQ96GI7 184 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF414Q96IQ9 312 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KREMEN1Q96MU8 473 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PBX4Q9BYU1 374 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PHACTR1Q9C0D0 580 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RNF38Q9H0F5 515 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RASSF4Q9H2L5 321 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ADAMTS10Q9H324 1103 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RSAD1Q9HA92 442 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF358Q9NW07 568 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 WDR70Q9NW82 654 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 AURKAIP1Q9NWT8 199 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SCHIP1Q9P0W5 487 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SERTAD1Q9UHV2 236 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PACSIN3Q9UKS6 424 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PROCRQ9UNN8 238 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ICKQ9UPZ9 632 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 BCS1LQ9Y276 419 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 INSL6Q9Y581 213 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CORINQ9Y5Q5 1042 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TACC3Q9Y6A5 838 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 NOTCH1P46531 2555 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SYNGAP1Q96PV0 1343 aa0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 COL3A1P02461 1466 aaPredicted RBP0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TENM3Q9P273 2699 aa0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TENM1Q9UKZ4 2725 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms