RNA–Protein interactions for RNA: ENST00000390362.1

TRBV5-3-201, Transcript of T cell receptor beta variable 5-3 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRBV5-3, Length 343 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3-201ENST00000390362 TMTC2Q8N394 836 aa9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 SMCR8Q8TEV9 937 aaPredicted RBP9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 ZIC5Q96T25 663 aa9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 PTPN18Q99952 460 aa9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 UBAC1Q9BSL1 405 aa9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 LSG1Q9H089 658 aaKnown RBP9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 VCPKMTQ9H867 229 aa9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 CLIP2Q9UDT6 1046 aa9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 RBM8AQ9Y5S9 174 aaKnown RBP9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 ATAD5Q96QE3 1844 aa9.39□□□□□ -0.91
TRBV5-3-201ENST00000390362 MYPNQ86TC9 1320 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 IGKV6D-41A0A0C4DH26 115 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 IGF2BP3O00425 579 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 FKTNO75072 461 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 TOP1P11387 765 aaKnown RBP9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 GUCY1A2P33402 732 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 JAG1P78504 1218 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 COG2Q14746 738 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 NECTIN1Q15223 517 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 FAM47AQ5JRC9 791 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 GPAT2Q6NUI2 795 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 FAM43AQ8N2R8 423 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 MB21D1Q8N884 522 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 GMCL1P1Q8NEA9 526 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 CEP95Q96GE4 821 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 ERO1AQ96HE7 468 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 EMILIN3Q9NT22 766 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 STX8Q9UNK0 236 aa9.38□□□□□ -0.91
TRBV5-3-201ENST00000390362 E7EWF7 191 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 F5H6K3 240 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 GPR25O00155 361 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 TBC1D8O95759 1140 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 CYP21A2P08686 494 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 PSMA5P28066 241 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 HOXD10P28358 340 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 MCM5P33992 734 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 CCNA1P78396 465 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 SP3Q02447 781 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 EVX2Q03828 476 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 KLRC3Q07444 240 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 CRHR2Q13324 411 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 MOGSQ13724 837 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 PKN2Q16513 984 aaKnown RBP9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 CREB3L3Q68CJ9 461 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 SKAP1Q86WV1 359 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 ACER1Q8TDN7 264 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 CHURC1Q8WUH1 139 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 ANKS1AQ92625 1134 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 ZSCAN10Q96SZ4 725 aaPredicted RBP9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 ZSWIM5Q9P217 1185 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 PNMA2Q9UL42 364 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 CTDP1Q9Y5B0 961 aaPredicted RBP9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 GTF3C3Q9Y5Q9 886 aa9.37□□□□□ -0.91
TRBV5-3-201ENST00000390362 PHIPQ8WWQ0 1821 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 A0A1W2PRG0 241 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 B4E1Z4 1266 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 FOXN1O15353 648 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 RAD21O60216 631 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 PLA2G6O60733 806 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 KDM4AO75164 1064 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 HSPA8P11142 646 aaKnown RBP9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 VCAM1P19320 739 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 NOVP48745 357 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 LBX2Q6XYB7 198 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 CCDC84Q86UT8 332 aaPredicted RBP9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 TBC1D10CQ8IV04 446 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 CCAR1Q8IX12 1150 aaKnown RBP9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 PRPF38AQ8NAV1 312 aaKnown RBP9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 IL27Q8NEV9 243 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 DCAF4Q8WV16 495 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 GMCL1Q96IK5 515 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 TMEM87BQ96K49 555 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 ASCC2Q9H1I8 757 aaPredicted RBP9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 IL25Q9H293 177 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 RPAP3Q9H6T3 665 aaPredicted RBP9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 FEM1BQ9UK73 627 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 RABGAP1Q9Y3P9 1069 aa9.36□□□□□ -0.91
TRBV5-3-201ENST00000390362 WDR19Q8NEZ3 1342 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 SMIM22K7EJ46 135 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 SLC27A2O14975 620 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 BMP3P12645 472 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 COPB2P35606 906 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 SLC1A4P43007 532 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 LBX1P52954 281 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 PRMT2P55345 433 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 HERVK_113P62684 666 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 TREML2Q5T2D2 321 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 GPATCH4Q5T3I0 446 aaKnown RBP9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 IFIT1BQ5T764 474 aaKnown RBP9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 SLFN13Q68D06 897 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 C17orf99Q6UX52 265 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 FAM160B2Q86V87 743 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 GPRC5AQ8NFJ5 357 aa9.35□□□□□ -0.91
TRBV5-3-201ENST00000390362 NEK1Q96PY6 1258 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms