RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 CCNA1P78396 465 aa21.79■■□□□ 1.08
CD9-204ENST00000382519 SBK1Q52WX2 424 aa21.79■■□□□ 1.08
CD9-204ENST00000382519 SEC62Q99442 399 aaKnown RBP21.79■■□□□ 1.08
CD9-204ENST00000382519 ROBO3Q96MS0 1386 aa21.78■■□□□ 1.08
CD9-204ENST00000382519 WDR78Q5VTH9 848 aa21.78■■□□□ 1.08
CD9-204ENST00000382519 GPR142Q7Z601 462 aa21.78■■□□□ 1.08
CD9-204ENST00000382519 PLEKHH3Q7Z736 793 aa21.78■■□□□ 1.08
CD9-204ENST00000382519 SPICE1Q8N0Z3 855 aa21.78■■□□□ 1.08
CD9-204ENST00000382519 U2AF1L4Q8WU68 220 aaKnown RBP21.78■■□□□ 1.08
CD9-204ENST00000382519 TMX2Q9Y320 296 aa21.78■■□□□ 1.08
CD9-204ENST00000382519 MYH4Q9Y623 1939 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 KIAA1755Q5JYT7 1200 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 ZMYM1Q5SVZ6 1142 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 LBX2Q6XYB7 198 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 SIAH1Q8IUQ4 282 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 EXOC6Q8TAG9 804 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 LPAR1Q92633 364 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 VCPKMTQ9H867 229 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 KANSL2Q9H9L4 492 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 MKNK2Q9HBH9 465 aa21.77■■□□□ 1.08
CD9-204ENST00000382519 PATL2C9JE40 543 aaKnown RBP21.76■■□□□ 1.07
CD9-204ENST00000382519 EEF2P13639 858 aaKnown RBP21.76■■□□□ 1.07
CD9-204ENST00000382519 RASA1P20936 1047 aa21.76■■□□□ 1.07
CD9-204ENST00000382519 PDE1AP54750 535 aa21.76■■□□□ 1.07
CD9-204ENST00000382519 TRIB2Q92519 343 aa21.76■■□□□ 1.07
CD9-204ENST00000382519 DEFB118Q96PH6 123 aa21.76■■□□□ 1.07
CD9-204ENST00000382519 NACAP1Q9BZK3 213 aa21.76■■□□□ 1.07
CD9-204ENST00000382519 LNPKQ9C0E8 428 aa21.76■■□□□ 1.07
CD9-204ENST00000382519 RWDD1Q9H446 243 aaPredicted RBP21.76■■□□□ 1.07
CD9-204ENST00000382519 BTBD7Q9P203 1132 aa21.76■■□□□ 1.07
CD9-204ENST00000382519 MKI67P46013 3256 aaKnown RBP21.75■■□□□ 1.07
CD9-204ENST00000382519 RAD21O60216 631 aa21.75■■□□□ 1.07
CD9-204ENST00000382519 RGS2P41220 211 aa21.75■■□□□ 1.07
CD9-204ENST00000382519 TRIM32Q13049 653 aa21.75■■□□□ 1.07
CD9-204ENST00000382519 COG2Q14746 738 aa21.75■■□□□ 1.07
CD9-204ENST00000382519 B4GALNT3Q6L9W6 998 aa21.75■■□□□ 1.07
CD9-204ENST00000382519 SAMD1Q6SPF0 538 aaPredicted RBP21.75■■□□□ 1.07
CD9-204ENST00000382519 IFNL3Q8IZI9 196 aa21.75■■□□□ 1.07
CD9-204ENST00000382519 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.75■■□□□ 1.07
CD9-204ENST00000382519 STAP2Q9UGK3 403 aa21.75■■□□□ 1.07
CD9-204ENST00000382519 COL11A1P12107 1806 aaPredicted RBP21.75■■□□□ 1.07
CD9-204ENST00000382519 WDR46O15213 610 aaKnown RBP21.74■■□□□ 1.07
CD9-204ENST00000382519 FLOT1O75955 427 aa21.74■■□□□ 1.07
CD9-204ENST00000382519 SGPL1O95470 568 aa21.74■■□□□ 1.07
CD9-204ENST00000382519 ZKSCAN1P17029 563 aaPredicted RBP21.74■■□□□ 1.07
CD9-204ENST00000382519 EVI5LQ96CN4 794 aa21.74■■□□□ 1.07
CD9-204ENST00000382519 NAPBQ9H115 298 aa21.74■■□□□ 1.07
CD9-204ENST00000382519 GOPCQ9HD26 462 aa21.74■■□□□ 1.07
CD9-204ENST00000382519 PAK6Q9NQU5 681 aaPredicted RBP21.74■■□□□ 1.07
CD9-204ENST00000382519 HOXC10Q9NYD6 342 aa21.74■■□□□ 1.07
CD9-204ENST00000382519 IVNS1ABPQ9Y6Y0 642 aa21.74■■□□□ 1.07
CD9-204ENST00000382519 FARP2O94887 1054 aaPredicted RBP21.73■■□□□ 1.07
CD9-204ENST00000382519 TFRCP02786 760 aaKnown RBP21.73■■□□□ 1.07
CD9-204ENST00000382519 XRCC5P13010 732 aaKnown RBP21.73■■□□□ 1.07
CD9-204ENST00000382519 MORN1Q5T089 497 aa21.73■■□□□ 1.07
CD9-204ENST00000382519 CCDC129Q6ZRS4 1044 aa21.73■■□□□ 1.07
CD9-204ENST00000382519 SMC5Q8IY18 1101 aa21.73■■□□□ 1.07
CD9-204ENST00000382519 APBA2Q99767 749 aa21.73■■□□□ 1.07
CD9-204ENST00000382519 ZNF287Q9HBT7 754 aa21.73■■□□□ 1.07
CD9-204ENST00000382519 PRDM1O75626 825 aa21.72■■□□□ 1.07
CD9-204ENST00000382519 MAP2K5Q13163 448 aa21.72■■□□□ 1.07
CD9-204ENST00000382519 TRMT44Q8IYL2 757 aaKnown RBP21.72■■□□□ 1.07
CD9-204ENST00000382519 USP6NLQ92738 828 aa21.72■■□□□ 1.07
CD9-204ENST00000382519 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.72■■□□□ 1.07
CD9-204ENST00000382519 HMX1Q9NP08 348 aaPredicted RBP21.72■■□□□ 1.07
CD9-204ENST00000382519 ZNF236Q9UL36 1845 aa21.71■■□□□ 1.07
CD9-204ENST00000382519 PRKAR2AP13861 404 aaKnown RBP21.71■■□□□ 1.07
CD9-204ENST00000382519 DSG3P32926 999 aa21.71■■□□□ 1.07
CD9-204ENST00000382519 PLS1Q14651 629 aa21.71■■□□□ 1.07
CD9-204ENST00000382519 ZNF444Q8N0Y2 327 aaPredicted RBP21.71■■□□□ 1.07
CD9-204ENST00000382519 MB21D1Q8N884 522 aa21.71■■□□□ 1.07
CD9-204ENST00000382519 ATG4CQ96DT6 458 aa21.71■■□□□ 1.07
CD9-204ENST00000382519 SUPT16HQ9Y5B9 1047 aaKnown RBP21.71■■□□□ 1.07
CD9-204ENST00000382519 RPTORQ8N122 1335 aa21.71■■□□□ 1.07
CD9-204ENST00000382519 SLC15A5A6NIM6 579 aa21.7■■□□□ 1.06
CD9-204ENST00000382519 IGHDP01880 384 aa21.7■■□□□ 1.06
CD9-204ENST00000382519 SLC3A2P08195 630 aaKnown RBP21.7■■□□□ 1.06
CD9-204ENST00000382519 PTPREP23469 700 aa21.7■■□□□ 1.06
CD9-204ENST00000382519 CCL14Q16627 93 aa21.7■■□□□ 1.06
CD9-204ENST00000382519 MOV10L1Q9BXT6 1211 aaKnown RBP21.7■■□□□ 1.06
CD9-204ENST00000382519 SPATC1LQ9H0A9 340 aa21.7■■□□□ 1.06
CD9-204ENST00000382519 TRIM6-TRIM34B2RNG4 842 aa21.69■■□□□ 1.06
CD9-204ENST00000382519 PDE4BQ07343 736 aa21.69■■□□□ 1.06
CD9-204ENST00000382519 PPARAQ07869 468 aa21.69■■□□□ 1.06
CD9-204ENST00000382519 FAM83BQ5T0W9 1011 aa21.69■■□□□ 1.06
CD9-204ENST00000382519 UBE2Q1Q7Z7E8 422 aa21.69■■□□□ 1.06
CD9-204ENST00000382519 CHD1LQ86WJ1 897 aa21.69■■□□□ 1.06
CD9-204ENST00000382519 NYAP2Q9P242 653 aa21.69■■□□□ 1.06
CD9-204ENST00000382519 GRB14Q14449 540 aa21.68■■□□□ 1.06
CD9-204ENST00000382519 DPF3Q92784 378 aa21.68■■□□□ 1.06
CD9-204ENST00000382519 HTATIP2Q9BUP3 242 aa21.68■■□□□ 1.06
CD9-204ENST00000382519 CRISPLD2Q9H0B8 497 aa21.68■■□□□ 1.06
CD9-204ENST00000382519 FBXO28Q9NVF7 368 aa21.68■■□□□ 1.06
CD9-204ENST00000382519 FRMPD3Q5JV73 1810 aa21.68■■□□□ 1.06
CD9-204ENST00000382519 TSPY3P0CV98 308 aa21.67■■□□□ 1.06
CD9-204ENST00000382519 TSPY8P0CW00 308 aa21.67■■□□□ 1.06
CD9-204ENST00000382519 CAPN2P17655 700 aa21.67■■□□□ 1.06
CD9-204ENST00000382519 ERCC3P19447 782 aa21.67■■□□□ 1.06
CD9-204ENST00000382519 MAP3K21Q5TCX8 1036 aa21.67■■□□□ 1.06
CD9-204ENST00000382519 NCAPG2Q86XI2 1143 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms