RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 MAP2K2P36507 400 aa15.55■□□□□ 0.08
SNPH-201ENST00000381867 MTMR3Q13615 1198 aa15.55■□□□□ 0.08
SNPH-201ENST00000381867 GKAP1Q5VSY0 366 aaPredicted RBP15.55■□□□□ 0.08
SNPH-201ENST00000381867 CNNM4Q6P4Q7 775 aa15.55■□□□□ 0.08
SNPH-201ENST00000381867 ARHGAP24Q8N264 748 aa15.55■□□□□ 0.08
SNPH-201ENST00000381867 MCUR1Q96AQ8 359 aa15.55■□□□□ 0.08
SNPH-201ENST00000381867 RABEP2Q9H5N1 569 aa15.55■□□□□ 0.08
SNPH-201ENST00000381867 BRD3Q15059 726 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 ZNF174Q15697 407 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 CASQ2O14958 399 aaPredicted RBP15.54■□□□□ 0.08
SNPH-201ENST00000381867 ZWINTO95229 277 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 ASIC2Q16515 512 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 TSKSQ9UJT2 592 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 SNX14Q9Y5W7 946 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 ZNF500O60304 480 aaPredicted RBP15.54■□□□□ 0.08
SNPH-201ENST00000381867 PDE4DQ08499 809 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 PAK1Q13153 545 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 UAP1Q16222 522 aaPredicted RBP15.54■□□□□ 0.08
SNPH-201ENST00000381867 ZNF354CQ86Y25 554 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 FAM184BQ9ULE4 1060 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 SLC27A2O14975 620 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 TNFAIP3P21580 790 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 CCDC38Q502W7 563 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 TTLL7Q6ZT98 887 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 DSCC1Q9BVC3 393 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 SGSM2O43147 1006 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 SND1Q7KZF4 910 aaKnown RBP eCLIP15.54■□□□□ 0.08
SNPH-201ENST00000381867 UBL4BQ8N7F7 174 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 CEP120Q8N960 986 aa15.54■□□□□ 0.08
SNPH-201ENST00000381867 ZNF594Q96JF6 807 aaPredicted RBP15.54■□□□□ 0.08
SNPH-201ENST00000381867 ARHGEF2Q92974 986 aaKnown RBP15.53■□□□□ 0.08
SNPH-201ENST00000381867 LZTS2Q9BRK4 669 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 PLCB1Q9NQ66 1216 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 GADD45BO75293 160 aaPredicted RBP15.53■□□□□ 0.08
SNPH-201ENST00000381867 GMNNO75496 209 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 ZNF131P52739 623 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 ERCC6LQ2NKX8 1250 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 CCDC62Q6P9F0 684 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 FRMD4BQ9Y2L6 1034 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 DEXIO95424 95 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 PARP1P09874 1014 aaKnown RBP15.53■□□□□ 0.08
SNPH-201ENST00000381867 MRPS9P82933 396 aaKnown RBP15.53■□□□□ 0.08
SNPH-201ENST00000381867 CSGALNACT2Q8N6G5 542 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 RPGRIP1Q96KN7 1286 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 ASAP1Q9ULH1 1129 aa15.53■□□□□ 0.08
SNPH-201ENST00000381867 GPAA1O43292 621 aa15.52■□□□□ 0.08
SNPH-201ENST00000381867 ZNF365Q70YC5 407 aa15.52■□□□□ 0.08
SNPH-201ENST00000381867 KIFAP3Q92845 792 aa15.52■□□□□ 0.08
SNPH-201ENST00000381867 SPATA31A6Q5VVP1 1343 aa15.52■□□□□ 0.08
SNPH-201ENST00000381867 RNASE9P60153 205 aaKnown RBP15.52■□□□□ 0.08
SNPH-201ENST00000381867 LEMD3Q9Y2U8 911 aa15.52■□□□□ 0.08
SNPH-201ENST00000381867 CRB1P82279 1406 aa15.52■□□□□ 0.08
SNPH-201ENST00000381867 E7EVH7 732 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 ZNF202O95125 648 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 VPS52Q8N1B4 723 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 MAK16Q9BXY0 300 aaKnown RBP15.52■□□□□ 0.07
SNPH-201ENST00000381867 TECPR2O15040 1411 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 HSPA1LP34931 641 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 SLC9C1Q4G0N8 1177 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 ZNF408Q9H9D4 720 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 ARPP21Q9UBL0 812 aaPredicted RBP15.52■□□□□ 0.07
SNPH-201ENST00000381867 NFE2L3Q9Y4A8 694 aa15.52■□□□□ 0.07
SNPH-201ENST00000381867 KRT9P35527 623 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 CFAP221Q4G0U5 840 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 PHLDB2Q86SQ0 1253 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 POLR2DO15514 142 aaKnown RBP15.51■□□□□ 0.07
SNPH-201ENST00000381867 MTX1Q13505 466 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 PNPLA6Q8IY17 1366 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 NRXN1Q9ULB1 1477 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 ADAMTS13Q76LX8 1427 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 TNFAIP1Q13829 316 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 SEPT12Q8IYM1 358 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 MAGEA1P43355 309 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 FAM173BQ6P4H8 233 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 ODF2LQ9ULJ1 636 aa15.51■□□□□ 0.07
SNPH-201ENST00000381867 CEP104O60308 925 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 WHAMMP3Q1A5X7 153 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 USPL1Q5W0Q7 1092 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 SEPT14Q6ZU15 432 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 TRIM31Q9BZY9 425 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 VGLL3A8MV65 326 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 HHATQ5VTY9 493 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 CC2D2BQ6DHV5 1058 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 C2CD5Q86YS7 1000 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 KLHL7Q8IXQ5 586 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 FAM212AQ96EL1 285 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 RIMS1Q86UR5 1692 aaKnown RBP15.5■□□□□ 0.07
SNPH-201ENST00000381867 SETSIPP0DME0 302 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 RNF10Q8N5U6 811 aaKnown RBP15.5■□□□□ 0.07
SNPH-201ENST00000381867 PICK1Q9NRD5 415 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 BAIAP2L1Q9UHR4 511 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 ZBTB21Q9ULJ3 1066 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 ADRA2BP18089 450 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 SP4Q02446 784 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 LONRF3Q496Y0 759 aa15.5■□□□□ 0.07
SNPH-201ENST00000381867 TM6SF1Q9BZW5 370 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms