RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 SH3BP1Q9Y3L3 701 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 CD44P16070 742 aaKnown RBP21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 UBXN1Q04323 297 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 SPRED3Q2MJR0 410 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 HIBCHQ6NVY1 386 aaPredicted RBP21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 USHBP1Q8N6Y0 703 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 DBF4Q9UBU7 674 aaPredicted RBP21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 HPS5Q9UPZ3 1129 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 CLTCQ00610 1675 aaKnown RBP21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 EPB41P11171 864 aaKnown RBP21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 MDH1P40925 334 aaKnown RBP21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 GUCY2FP51841 1108 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 VAV2P52735 878 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 SNX1Q13596 522 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 KRT31Q15323 416 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 PPP1R7Q15435 360 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 TLDC1Q6P9B6 456 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 KDM7AQ6ZMT4 941 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 SPDYE1Q8NFV5 336 aaPredicted RBP21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 EMBQ6PCB8 327 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 STAMBPL1Q96FJ0 436 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 YIPF3Q9GZM5 350 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 CXCR5P32302 372 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 DRP2Q13474 957 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 MICU3Q86XE3 530 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 CCDC26Q8TAB7 109 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 STAMQ92783 540 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 DUSP10Q9Y6W6 482 aa21.22■□□□□ 0.99
SMARCD1-201ENST00000381513 CSB-PGBD3P0DP91 1061 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 SARSP49591 514 aaKnown RBP21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 SLC8A3P57103 927 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 CAPRIN2Q6IMN6 1127 aaKnown RBP21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 USP49Q70CQ1 688 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 MYH15Q9Y2K3 1946 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 FAM237AA0A1B0GTK4 181 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 CAND2O75155 1236 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 RWDD2BP57060 319 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 RCSD1Q6JBY9 416 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 OSBPL7Q9BZF2 842 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 LUC7L2Q9Y383 392 aaKnown RBP21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 METAP2P50579 478 aaKnown RBP eCLIP21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 WASHC4Q2M389 1173 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 ODF2Q5BJF6 829 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 OR8K1Q8NGG5 319 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 HAUS7Q99871 368 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 LACRTQ9GZZ8 138 aa21.21■□□□□ 0.99
SMARCD1-201ENST00000381513 GOLGA6L10A6NI86 522 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 KRT83P78385 493 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 IMMTQ16891 758 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 TCP11Q8WWU5 503 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 NCAPD2Q15021 1401 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 ESYT3A0FGR9 886 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 KANK3Q6NY19 840 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 C8orf74Q6P047 294 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 NOD2Q9HC29 1040 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 STIM2Q9P246 746 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 ACEP12821 1306 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 ERCC6L2Q5T890 1561 aa21.2■□□□□ 0.98
SMARCD1-201ENST00000381513 CLTAP09496 248 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 SCTRP47872 440 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 HERVK_113P62684 666 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 IFFO1Q0D2I5 559 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 FBXO31Q5XUX0 539 aaPredicted RBP21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 SPATA4Q8NEY3 305 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 LINS1Q8NG48 757 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 EHD2Q9NZN4 543 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 CYP27A1Q02318 531 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 ANKRD20A8PQ5CZ79 823 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 TATDN2Q93075 761 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 HELLSQ9NRZ9 838 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 PAG1Q9NWQ8 432 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 NFU1Q9UMS0 254 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 KIF4AO95239 1232 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 COPB1P53618 953 aaKnown RBP21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 RIC3Q7Z5B4 369 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 LGR6Q9HBX8 967 aa21.19■□□□□ 0.98
SMARCD1-201ENST00000381513 TTC26A0AVF1 554 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 ZNF233A6NK53 670 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 SNUPNO95149 360 aaKnown RBP21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 DNA2P51530 1060 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 THEMIS2Q5TEJ8 643 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 NT5DC1Q5TFE4 455 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 UBE3BQ7Z3V4 1068 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 HOOK2Q96ED9 719 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 SPAG5Q96R06 1193 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 SH3TC1Q8TE82 1336 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 EIF4E1BA6NMX2 242 aaKnown RBP21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 CDKAL1Q5VV42 579 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 SMCR8Q8TEV9 937 aaPredicted RBP21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 L3MBTL1Q9Y468 752 aa21.18■□□□□ 0.98
SMARCD1-201ENST00000381513 BTBD18B2RXH4 712 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 TTF1Q15361 905 aaPredicted RBP21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 SAFBQ15424 915 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 CACNA2D3Q8IZS8 1091 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 MAPK8IP1Q9UQF2 711 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 RIMS1Q86UR5 1692 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 FAM208AQ9UK61 1670 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 UBE2Q2LH0YL09 131 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms