RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 NOM1Q5C9Z4 860 aaKnown RBP22.91■■□□□ 1.26
GTF3A-201ENST00000381140 LRRC47Q8N1G4 583 aaKnown RBP22.91■■□□□ 1.26
GTF3A-201ENST00000381140 CD99L2Q8TCZ2 262 aa22.91■■□□□ 1.26
GTF3A-201ENST00000381140 TANGO6Q9C0B7 1094 aa22.91■■□□□ 1.26
GTF3A-201ENST00000381140 LSG1Q9H089 658 aaKnown RBP22.91■■□□□ 1.26
GTF3A-201ENST00000381140 VCPKMTQ9H867 229 aa22.91■■□□□ 1.26
GTF3A-201ENST00000381140 GOPCQ9HD26 462 aa22.91■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L15C9J2P7 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L13C9JLJ4 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L11C9JVI0 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L18D6R9N7 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L22D6RA61 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L17D6RBQ6 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L19D6RCP7 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L20D6RJB6 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 TTLL1O95922 423 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 PCP11498 1178 aaKnown RBP22.9■■□□□ 1.26
GTF3A-201ENST00000381140 HOXA7P31268 230 aaPredicted RBP22.9■■□□□ 1.26
GTF3A-201ENST00000381140 USP17L24Q0WX57 530 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 SAMD1Q6SPF0 538 aaPredicted RBP22.9■■□□□ 1.26
GTF3A-201ENST00000381140 MAP4K1Q92918 833 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 P2RX7Q99572 595 aaKnown RBP22.9■■□□□ 1.26
GTF3A-201ENST00000381140 STX8Q9UNK0 236 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 PARP14Q460N5 1801 aa22.9■■□□□ 1.26
GTF3A-201ENST00000381140 B4E1Z4 1266 aa22.89■■□□□ 1.26
GTF3A-201ENST00000381140 C17orf99Q6UX52 265 aa22.89■■□□□ 1.26
GTF3A-201ENST00000381140 ANKRD13CQ8N6S4 541 aa22.89■■□□□ 1.26
GTF3A-201ENST00000381140 NKX2-3Q8TAU0 364 aa22.89■■□□□ 1.26
GTF3A-201ENST00000381140 ESR2Q92731 530 aa22.89■■□□□ 1.26
GTF3A-201ENST00000381140 CHMP4CQ96CF2 233 aa22.89■■□□□ 1.26
GTF3A-201ENST00000381140 ERO1AQ96HE7 468 aa22.89■■□□□ 1.26
GTF3A-201ENST00000381140 KDM4AO75164 1064 aa22.89■■□□□ 1.25
GTF3A-201ENST00000381140 CYP21A2P08686 494 aa22.89■■□□□ 1.25
GTF3A-201ENST00000381140 LPAR1Q92633 364 aa22.89■■□□□ 1.25
GTF3A-201ENST00000381140 IL17RBQ9NRM6 502 aa22.89■■□□□ 1.25
GTF3A-201ENST00000381140 HERVK_113P62684 666 aa22.88■■□□□ 1.25
GTF3A-201ENST00000381140 CATSPERGQ6ZRH7 1159 aa22.88■■□□□ 1.25
GTF3A-201ENST00000381140 NUP88Q99567 741 aaPredicted RBP22.88■■□□□ 1.25
GTF3A-201ENST00000381140 ZKSCAN3Q9BRR0 538 aa22.88■■□□□ 1.25
GTF3A-201ENST00000381140 ISY1Q9ULR0 285 aaKnown RBP22.88■■□□□ 1.25
GTF3A-201ENST00000381140 MTMR7Q9Y216 660 aa22.88■■□□□ 1.25
GTF3A-201ENST00000381140 RLFQ13129 1914 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 BCRP11274 1271 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 KIF22Q14807 665 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 PPP4R3BQ5MIZ7 849 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 FAM83BQ5T0W9 1011 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 PAGR1Q9BTK6 254 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 KRT23Q9C075 422 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 CNNM2Q9H8M5 875 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 TAF6LQ9Y6J9 622 aa22.87■■□□□ 1.25
GTF3A-201ENST00000381140 COL11A1P12107 1806 aaPredicted RBP22.86■■□□□ 1.25
GTF3A-201ENST00000381140 F5H6K3 240 aa22.86■■□□□ 1.25
GTF3A-201ENST00000381140 WDR46O15213 610 aaKnown RBP22.86■■□□□ 1.25
GTF3A-201ENST00000381140 PEX10O60683 326 aa22.86■■□□□ 1.25
GTF3A-201ENST00000381140 NDUFB10O96000 172 aa22.86■■□□□ 1.25
GTF3A-201ENST00000381140 GCLCP48506 637 aaPredicted RBP22.86■■□□□ 1.25
GTF3A-201ENST00000381140 KLRC3Q07444 240 aa22.86■■□□□ 1.25
GTF3A-201ENST00000381140 ARHGAP39Q9C0H5 1083 aa22.86■■□□□ 1.25
GTF3A-201ENST00000381140 DOCK3Q8IZD9 2030 aa22.85■■□□□ 1.25
GTF3A-201ENST00000381140 FLOT1O75955 427 aa22.85■■□□□ 1.25
GTF3A-201ENST00000381140 LACTBP83111 547 aaPredicted RBP22.85■■□□□ 1.25
GTF3A-201ENST00000381140 TRDNQ13061 729 aa22.85■■□□□ 1.25
GTF3A-201ENST00000381140 CTU1Q7Z7A3 348 aaKnown RBP22.85■■□□□ 1.25
GTF3A-201ENST00000381140 MKL1Q969V6 931 aa22.85■■□□□ 1.25
GTF3A-201ENST00000381140 TRIM17Q9Y577 477 aa22.85■■□□□ 1.25
GTF3A-201ENST00000381140 CAP1Q01518 475 aa22.84■■□□□ 1.25
GTF3A-201ENST00000381140 SLFN13Q68D06 897 aa22.84■■□□□ 1.25
GTF3A-201ENST00000381140 TNS4Q8IZW8 715 aa22.84■■□□□ 1.25
GTF3A-201ENST00000381140 E7EWF7 191 aa22.83■■□□□ 1.25
GTF3A-201ENST00000381140 COG2Q14746 738 aa22.83■■□□□ 1.25
GTF3A-201ENST00000381140 CREB3L3Q68CJ9 461 aa22.83■■□□□ 1.25
GTF3A-201ENST00000381140 RALYLQ86SE5 291 aaKnown RBP22.83■■□□□ 1.25
GTF3A-201ENST00000381140 IQCA1Q86XH1 822 aa22.83■■□□□ 1.25
GTF3A-201ENST00000381140 EFCC1Q9HA90 598 aa22.83■■□□□ 1.25
GTF3A-201ENST00000381140 TCP11L1Q9NUJ3 509 aa22.83■■□□□ 1.25
GTF3A-201ENST00000381140 ZSWIM5Q9P217 1185 aa22.83■■□□□ 1.25
GTF3A-201ENST00000381140 SPDYE16A6NNV3 312 aaPredicted RBP22.82■■□□□ 1.24
GTF3A-201ENST00000381140 SLC27A2O14975 620 aa22.82■■□□□ 1.24
GTF3A-201ENST00000381140 FMNL1O95466 1100 aaPredicted RBP22.82■■□□□ 1.24
GTF3A-201ENST00000381140 PSMC4P43686 418 aa22.82■■□□□ 1.24
GTF3A-201ENST00000381140 FAM110CQ1W6H9 321 aa22.82■■□□□ 1.24
GTF3A-201ENST00000381140 STOX1Q6ZVD7 989 aa22.82■■□□□ 1.24
GTF3A-201ENST00000381140 GMCL1P1Q8NEA9 526 aa22.82■■□□□ 1.24
GTF3A-201ENST00000381140 UBAC1Q9BSL1 405 aa22.82■■□□□ 1.24
GTF3A-201ENST00000381140 TXNRD2Q9NNW7 524 aa22.82■■□□□ 1.24
GTF3A-201ENST00000381140 FBXO28Q9NVF7 368 aa22.82■■□□□ 1.24
GTF3A-201ENST00000381140 TOP1P11387 765 aaKnown RBP22.81■■□□□ 1.24
GTF3A-201ENST00000381140 ARHGEF6Q15052 776 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 CYB5R4Q7L1T6 521 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 OTOP1Q7RTM1 612 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 NCOA7Q8NI08 942 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 GTF3C2Q8WUA4 911 aaPredicted RBP22.81■■□□□ 1.24
GTF3A-201ENST00000381140 TMEM47Q9BQJ4 181 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 MCOLN1Q9GZU1 580 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 HOXC10Q9NYD6 342 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 RBPJLQ9UBG7 517 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 SYNPO2Q9UMS6 1093 aa22.81■■□□□ 1.24
GTF3A-201ENST00000381140 A0A0G2JMZ2 1700 aa22.8■■□□□ 1.24
GTF3A-201ENST00000381140 MCCP23508 829 aa22.8■■□□□ 1.24
GTF3A-201ENST00000381140 CTGFP29279 349 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms