RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 PRELPP51888 382 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
FAM239A-201ENST00000381108 LRRC47Q8N1G4 583 aaKnown RBP12.66□□□□□ -0.38
FAM239A-201ENST00000381108 AGBL3Q8NEM8 1001 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 ANKS1AQ92625 1134 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 VPS54Q9P1Q0 977 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 CFAP45Q9UL16 551 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 ATP2B2Q01814 1243 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 CSRNP1Q96S65 589 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 FHDC1Q9C0D6 1143 aaPredicted RBP12.66□□□□□ -0.38
FAM239A-201ENST00000381108 EHD4Q9H223 541 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 ZNF70Q9UC06 446 aaPredicted RBP12.66□□□□□ -0.38
FAM239A-201ENST00000381108 SCAF8Q9UPN6 1271 aaKnown RBP12.66□□□□□ -0.38
FAM239A-201ENST00000381108 GJA3Q9Y6H8 435 aa12.66□□□□□ -0.38
FAM239A-201ENST00000381108 ZNF445P59923 1031 aa12.65□□□□□ -0.38
FAM239A-201ENST00000381108 PKN1Q16512 942 aa12.65□□□□□ -0.38
FAM239A-201ENST00000381108 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
FAM239A-201ENST00000381108 MTMR4Q9NYA4 1195 aa12.65□□□□□ -0.38
FAM239A-201ENST00000381108 MAD2L2Q9UI95 211 aa12.65□□□□□ -0.38
FAM239A-201ENST00000381108 PLIN4Q96Q06 1357 aa12.65□□□□□ -0.38
FAM239A-201ENST00000381108 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
FAM239A-201ENST00000381108 MMP1P03956 469 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
FAM239A-201ENST00000381108 GRM4Q14833 912 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 TNIP1Q15025 636 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 NBPF9Q3BBW0 867 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 ZSCAN23Q3MJ62 389 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 MYSM1Q5VVJ2 828 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 USP17L2Q6R6M4 530 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 ZNF396Q96N95 335 aaPredicted RBP12.64□□□□□ -0.39
FAM239A-201ENST00000381108 CPVLQ9H3G5 476 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 ELP1O95163 1332 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 GOLGA6L4A6NEF3 574 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 BTBD18B2RXH4 712 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 ENTPD3O75355 529 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 GDF11O95390 407 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
FAM239A-201ENST00000381108 BRAPQ7Z569 592 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
FAM239A-201ENST00000381108 SHISA4Q96DD7 197 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 CLIP2Q9UDT6 1046 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 LTBP3Q9NS15 1303 aa12.64□□□□□ -0.39
FAM239A-201ENST00000381108 MYH4Q9Y623 1939 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 WNT10BO00744 389 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 RAD21O60216 631 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 EGFRP00533 1210 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 SAFBQ15424 915 aaKnown RBP eCLIP12.63□□□□□ -0.39
FAM239A-201ENST00000381108 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 CDAN1Q8IWY9 1227 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 CLIC4Q9Y696 253 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 ATRNL1Q5VV63 1379 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
FAM239A-201ENST00000381108 IGKV6D-41A0A0C4DH26 115 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 MYO1BO43795 1136 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 TTLL1O95922 423 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 PARP1P09874 1014 aaKnown RBP12.63□□□□□ -0.39
FAM239A-201ENST00000381108 VEGFAP15692 232 aaPredicted RBP12.63□□□□□ -0.39
FAM239A-201ENST00000381108 XBP1P17861 261 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 NR5A1Q13285 461 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 ARHGAP27Q6ZUM4 889 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 TMEM39BQ9GZU3 492 aa12.63□□□□□ -0.39
FAM239A-201ENST00000381108 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
FAM239A-201ENST00000381108 CNTNAP1P78357 1384 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 SYCE3A1L190 88 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 KLRF2D3W0D1 207 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 SCG2P13521 617 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 GMPSP49915 693 aaPredicted RBP12.62□□□□□ -0.39
FAM239A-201ENST00000381108 BICD2Q8TD16 824 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 OXER1Q8TDS5 423 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
FAM239A-201ENST00000381108 SYAP1Q96A49 352 aaPredicted RBP12.62□□□□□ -0.39
FAM239A-201ENST00000381108 PGBD1Q96JS3 809 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 MAP3K14Q99558 947 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
FAM239A-201ENST00000381108 CYTH3O43739 400 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 U2AF2P26368 475 aaKnown RBP eCLIP12.62□□□□□ -0.39
FAM239A-201ENST00000381108 ME1P48163 572 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 NOVP48745 357 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 GNAQP50148 359 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 CCDC173Q0VFZ6 552 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 SLC35G1Q2M3R5 365 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 NOSTRINQ8IVI9 506 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
FAM239A-201ENST00000381108 TRIM44Q96DX7 344 aaPredicted RBP12.62□□□□□ -0.39
FAM239A-201ENST00000381108 FZD9O00144 591 aa12.61□□□□□ -0.39
FAM239A-201ENST00000381108 PDHBP11177 359 aa12.61□□□□□ -0.39
FAM239A-201ENST00000381108 STK38Q15208 465 aa12.61□□□□□ -0.39
FAM239A-201ENST00000381108 PFKFB3Q16875 520 aaPredicted RBP12.61□□□□□ -0.39
FAM239A-201ENST00000381108 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
FAM239A-201ENST00000381108 HOMER1Q86YM7 354 aa12.61□□□□□ -0.39
FAM239A-201ENST00000381108 FOXP4Q8IVH2 680 aaPredicted RBP12.61□□□□□ -0.39
FAM239A-201ENST00000381108 FAM151AQ8WW52 585 aa12.61□□□□□ -0.39
FAM239A-201ENST00000381108 CCDC17Q96LX7 622 aa12.61□□□□□ -0.39
FAM239A-201ENST00000381108 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
FAM239A-201ENST00000381108 LIG1P18858 919 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms