RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 KBTBD13C9JR72 458 aa19.35■□□□□ 0.69
VCX3A-201ENST00000381089 PDE6AP16499 860 aa19.35■□□□□ 0.69
VCX3A-201ENST00000381089 ADORA2AP29274 412 aa19.35■□□□□ 0.69
VCX3A-201ENST00000381089 GUCY1A2P33402 732 aa19.35■□□□□ 0.69
VCX3A-201ENST00000381089 GABPAQ06546 454 aa19.35■□□□□ 0.69
VCX3A-201ENST00000381089 TMEM179Q6ZVK1 233 aa19.35■□□□□ 0.69
VCX3A-201ENST00000381089 CLASRPQ8N2M8 674 aaKnown RBP19.35■□□□□ 0.69
VCX3A-201ENST00000381089 MOV10L1Q9BXT6 1211 aaKnown RBP19.35■□□□□ 0.69
VCX3A-201ENST00000381089 SPATC1LQ9H0A9 340 aa19.35■□□□□ 0.69
VCX3A-201ENST00000381089 SWAP70Q9UH65 585 aa19.35■□□□□ 0.69
VCX3A-201ENST00000381089 RLBP1P12271 317 aa19.34■□□□□ 0.69
VCX3A-201ENST00000381089 CYBAP13498 195 aa19.34■□□□□ 0.69
VCX3A-201ENST00000381089 FAM109BQ6ICB4 259 aaPredicted RBP19.34■□□□□ 0.69
VCX3A-201ENST00000381089 MROH8Q9H579 483 aa19.34■□□□□ 0.69
VCX3A-201ENST00000381089 ARHGEF10LQ9HCE6 1279 aa19.34■□□□□ 0.69
VCX3A-201ENST00000381089 ZNF532Q9HCE3 1301 aa19.33■□□□□ 0.69
VCX3A-201ENST00000381089 ZNF236Q9UL36 1845 aa19.33■□□□□ 0.69
VCX3A-201ENST00000381089 IFIT2P09913 472 aaKnown RBP19.33■□□□□ 0.68
VCX3A-201ENST00000381089 ERCC3P19447 782 aa19.33■□□□□ 0.68
VCX3A-201ENST00000381089 RTP1P59025 263 aa19.33■□□□□ 0.68
VCX3A-201ENST00000381089 PLS1Q14651 629 aa19.33■□□□□ 0.68
VCX3A-201ENST00000381089 AMOTL1Q8IY63 956 aa19.33■□□□□ 0.68
VCX3A-201ENST00000381089 RHPN1Q8TCX5 695 aa19.33■□□□□ 0.68
VCX3A-201ENST00000381089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.33■□□□□ 0.68
VCX3A-201ENST00000381089 DNAJC2Q99543 621 aaKnown RBP19.33■□□□□ 0.68
VCX3A-201ENST00000381089 IL1RAPL2Q9NP60 686 aa19.33■□□□□ 0.68
VCX3A-201ENST00000381089 ATP11BQ9Y2G3 1177 aa19.33■□□□□ 0.68
VCX3A-201ENST00000381089 A0A1W2PRG0 241 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 GOLIM4O00461 696 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 SEPT4O43236 478 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 FLOT1O75955 427 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
VCX3A-201ENST00000381089 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
VCX3A-201ENST00000381089 NCAPG2Q86XI2 1143 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 ABRAQ8N0Z2 381 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 TRPV1Q8NER1 839 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 SDR42E1Q8WUS8 393 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 KIF1BPQ96EK5 621 aa19.32■□□□□ 0.68
VCX3A-201ENST00000381089 DCP1AQ9NPI6 582 aaPredicted RBP19.32■□□□□ 0.68
VCX3A-201ENST00000381089 CUL9Q8IWT3 2517 aa19.31■□□□□ 0.68
VCX3A-201ENST00000381089 HMMRO75330 724 aa19.31■□□□□ 0.68
VCX3A-201ENST00000381089 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
VCX3A-201ENST00000381089 MS4A1P11836 297 aa19.31■□□□□ 0.68
VCX3A-201ENST00000381089 ICA1Q05084 483 aa19.31■□□□□ 0.68
VCX3A-201ENST00000381089 DDRGK1Q96HY6 314 aa19.31■□□□□ 0.68
VCX3A-201ENST00000381089 POTEB2H3BUK9 544 aa19.3■□□□□ 0.68
VCX3A-201ENST00000381089 IGHA2P01877 340 aa19.3■□□□□ 0.68
VCX3A-201ENST00000381089 DSG3P32926 999 aa19.3■□□□□ 0.68
VCX3A-201ENST00000381089 ZNF697Q5TEC3 545 aa19.3■□□□□ 0.68
VCX3A-201ENST00000381089 SLC39A5Q6ZMH5 540 aa19.3■□□□□ 0.68
VCX3A-201ENST00000381089 LCORLQ8N3X6 602 aa19.3■□□□□ 0.68
VCX3A-201ENST00000381089 CCDC17Q96LX7 622 aa19.3■□□□□ 0.68
VCX3A-201ENST00000381089 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.3■□□□□ 0.68
VCX3A-201ENST00000381089 PRDM5Q9NQX1 630 aaPredicted RBP19.3■□□□□ 0.68
VCX3A-201ENST00000381089 ATP8A2Q9NTI2 1148 aa19.3■□□□□ 0.68
VCX3A-201ENST00000381089 MYH8P13535 1937 aa19.29■□□□□ 0.68
VCX3A-201ENST00000381089 A0A0G2JMZ2 1700 aa19.29■□□□□ 0.68
VCX3A-201ENST00000381089 WDR46O15213 610 aaKnown RBP19.29■□□□□ 0.68
VCX3A-201ENST00000381089 SLC25A27O95847 323 aa19.29■□□□□ 0.68
VCX3A-201ENST00000381089 FCER1AP12319 257 aa19.29■□□□□ 0.68
VCX3A-201ENST00000381089 VCPKMTQ9H867 229 aa19.29■□□□□ 0.68
VCX3A-201ENST00000381089 TMX2Q9Y320 296 aa19.29■□□□□ 0.68
VCX3A-201ENST00000381089 TCRBV5S4A2TA0A5A2 114 aa19.28■□□□□ 0.68
VCX3A-201ENST00000381089 APBB1O00213 710 aa19.28■□□□□ 0.68
VCX3A-201ENST00000381089 COBLO75128 1261 aa19.28■□□□□ 0.68
VCX3A-201ENST00000381089 ANO1Q5XXA6 986 aa19.28■□□□□ 0.68
VCX3A-201ENST00000381089 SAMD1Q6SPF0 538 aaPredicted RBP19.28■□□□□ 0.68
VCX3A-201ENST00000381089 RPAP2Q8IXW5 612 aaPredicted RBP19.28■□□□□ 0.68
VCX3A-201ENST00000381089 SPICE1Q8N0Z3 855 aa19.28■□□□□ 0.68
VCX3A-201ENST00000381089 SLC44A5Q8NCS7 719 aa19.28■□□□□ 0.68
VCX3A-201ENST00000381089 ARMT1Q9H993 441 aa19.28■□□□□ 0.68
VCX3A-201ENST00000381089 NRBP1Q9UHY1 535 aa19.28■□□□□ 0.68
VCX3A-201ENST00000381089 CYP2D6P10635 497 aa19.27■□□□□ 0.68
VCX3A-201ENST00000381089 PANK1Q8TE04 598 aa19.27■□□□□ 0.68
VCX3A-201ENST00000381089 ATG4CQ96DT6 458 aa19.27■□□□□ 0.68
VCX3A-201ENST00000381089 DYNLL2Q96FJ2 89 aa19.27■□□□□ 0.68
VCX3A-201ENST00000381089 MAML3Q96JK9 1138 aa19.27■□□□□ 0.68
VCX3A-201ENST00000381089 BCL11AQ9H165 835 aa19.27■□□□□ 0.68
VCX3A-201ENST00000381089 PAG1Q9NWQ8 432 aa19.27■□□□□ 0.68
VCX3A-201ENST00000381089 RLFQ13129 1914 aa19.27■□□□□ 0.67
VCX3A-201ENST00000381089 LAMA2P24043 3122 aaKnown RBP19.27■□□□□ 0.67
VCX3A-201ENST00000381089 RAB11FIP3O75154 756 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 MBD4O95243 580 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 RARBP10826 455 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 AKR1B1P15121 316 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 EVX2Q03828 476 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 SNX17Q15036 470 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 TRIM60Q495X7 471 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.26■□□□□ 0.67
VCX3A-201ENST00000381089 FAM161BQ96MY7 647 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 GOPCQ9HD26 462 aa19.26■□□□□ 0.67
VCX3A-201ENST00000381089 LTBP2Q14767 1821 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 COPB2P35606 906 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 ADD2P35612 726 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 ADCYAP1R1P41586 468 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 KCTD2Q14681 263 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 LRRC41Q15345 812 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 KIAA1755Q5JYT7 1200 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 C1orf53Q5VUE5 145 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 GUCD1Q96NT3 240 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms