RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 KAT14Q9H8E8 782 aa14.41□□□□□ -0.1
PUDP-201ENST00000381077 SBF2Q86WG5 1849 aa14.4□□□□□ -0.1
PUDP-201ENST00000381077 SLU7O95391 586 aaKnown RBP14.4□□□□□ -0.1
PUDP-201ENST00000381077 MYL1P05976 194 aa14.4□□□□□ -0.1
PUDP-201ENST00000381077 LONP1P36776 959 aaKnown RBP14.4□□□□□ -0.1
PUDP-201ENST00000381077 NLRP5P59047 1200 aa14.4□□□□□ -0.1
PUDP-201ENST00000381077 DPYDQ12882 1025 aa14.4□□□□□ -0.1
PUDP-201ENST00000381077 ISM2Q6H9L7 571 aa14.4□□□□□ -0.1
PUDP-201ENST00000381077 RCSD1Q6JBY9 416 aa14.4□□□□□ -0.1
PUDP-201ENST00000381077 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
PUDP-201ENST00000381077 NGLY1Q96IV0 654 aa14.4□□□□□ -0.1
PUDP-201ENST00000381077 SPATA31A6Q5VVP1 1343 aa14.4□□□□□ -0.1
PUDP-201ENST00000381077 TNRC6CQ9HCJ0 1690 aaKnown RBP14.4□□□□□ -0.1
PUDP-201ENST00000381077 NAV1Q8NEY1 1877 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 CYP2D7A0A087X1C5 515 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 A0A1B0GTH6 734 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 LAD1O00515 517 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 FOXN1O15353 648 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 PRDM1O75626 825 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 KLRK1P26718 216 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 GRM4Q14833 912 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 SPECC1Q5M775 1068 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 CERKQ8TCT0 537 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 SYMPKQ92797 1274 aaKnown RBP14.39□□□□□ -0.11
PUDP-201ENST00000381077 PAGE5Q96GU1 130 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 NAA15Q9BXJ9 866 aaKnown RBP14.39□□□□□ -0.11
PUDP-201ENST00000381077 RMND1Q9NWS8 449 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 MCM9Q9NXL9 1143 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 PLCG2P16885 1265 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 CDK11BP21127 795 aaKnown RBP14.39□□□□□ -0.11
PUDP-201ENST00000381077 SMARCA1P28370 1054 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 TXLNAP40222 546 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 ETF1P62495 437 aaKnown RBP14.39□□□□□ -0.11
PUDP-201ENST00000381077 DPF2Q92785 391 aa14.39□□□□□ -0.11
PUDP-201ENST00000381077 SRP68Q9UHB9 627 aaKnown RBP14.39□□□□□ -0.11
PUDP-201ENST00000381077 RFC4P35249 363 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 SPAG1Q07617 926 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 CUL4BQ13620 913 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 NR1I3Q14994 352 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 TRAPPC3LQ5T215 181 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 SLF2Q8IX21 1173 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 DHX58Q96C10 678 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 GTPBP4Q9BZE4 634 aaKnown RBP14.38□□□□□ -0.11
PUDP-201ENST00000381077 INTS13Q9NVM9 706 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 TRMT1Q9NXH9 659 aaKnown RBP14.38□□□□□ -0.11
PUDP-201ENST00000381077 TFCP2L1Q9NZI6 479 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 PCDHA4Q9UN74 947 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 WTIPA6NIX2 430 aaPredicted RBP14.38□□□□□ -0.11
PUDP-201ENST00000381077 ATP2B4P23634 1241 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 USP5P45974 858 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 FMR1Q06787 632 aaKnown RBP eCLIP14.38□□□□□ -0.11
PUDP-201ENST00000381077 PTGDRQ13258 359 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 ORC2Q13416 577 aaPredicted RBP14.38□□□□□ -0.11
PUDP-201ENST00000381077 E2F4Q16254 413 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 EARS2Q5JPH6 523 aaKnown RBP14.38□□□□□ -0.11
PUDP-201ENST00000381077 BLIDQ8IZY5 108 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 ZNF592Q92610 1267 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
PUDP-201ENST00000381077 PANX2Q96RD6 677 aa14.38□□□□□ -0.11
PUDP-201ENST00000381077 GTPBP6O43824 516 aaPredicted RBP14.37□□□□□ -0.11
PUDP-201ENST00000381077 FILIP1LQ4L180 1135 aa14.37□□□□□ -0.11
PUDP-201ENST00000381077 CCDC93Q567U6 631 aa14.37□□□□□ -0.11
PUDP-201ENST00000381077 CDKAL1Q5VV42 579 aa14.37□□□□□ -0.11
PUDP-201ENST00000381077 TMEM139Q8IV31 216 aa14.37□□□□□ -0.11
PUDP-201ENST00000381077 PNMA1Q8ND90 353 aa14.37□□□□□ -0.11
PUDP-201ENST00000381077 CCDC51Q96ER9 411 aa14.37□□□□□ -0.11
PUDP-201ENST00000381077 MAGEF1Q9HAY2 307 aa14.37□□□□□ -0.11
PUDP-201ENST00000381077 SYNRGQ9UMZ2 1314 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 DDX60LQ5H9U9 1706 aaKnown RBP14.36□□□□□ -0.11
PUDP-201ENST00000381077 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 ATP2B1P20020 1258 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 PRPHP41219 470 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 TFAP4Q01664 338 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 CRY2Q49AN0 593 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 USP49Q70CQ1 688 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 TMC4Q7Z404 712 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 SMAP1Q8IYB5 467 aaPredicted RBP14.36□□□□□ -0.11
PUDP-201ENST00000381077 PDILTQ8N807 584 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 CNBD1Q8NA66 436 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 CCDC12Q8WUD4 166 aaPredicted RBP14.36□□□□□ -0.11
PUDP-201ENST00000381077 EPSTI1Q96J88 318 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 C8orf37Q96NL8 207 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 BAG1Q99933 345 aaPredicted RBP14.36□□□□□ -0.11
PUDP-201ENST00000381077 M0R2N6 131 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 FAM47AQ5JRC9 791 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 TBC1D22AQ8WUA7 517 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 TSC1Q92574 1164 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 MKNK2Q9HBH9 465 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 ANKIB1Q9P2G1 1089 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
PUDP-201ENST00000381077 A0A087X0B3 334 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 FAM205CA6NFA0 338 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 LRRC10BA6NIK2 292 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 hCG_1984214I3L0E3 225 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 NPHP1O15259 732 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 IL1R1P14778 569 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 ZNF174Q15697 407 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 PIK3AP1Q6ZUJ8 805 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms