RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 CDKAL1Q5VV42 579 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 ADD3Q9UEY8 706 aaKnown RBP18.52■□□□□ 0.56
VPS16-203ENST00000380469 MRFAP1Q9Y605 127 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 CACNA1SQ13698 1873 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 BAZ2AQ9UIF9 1905 aaKnown RBP18.52■□□□□ 0.56
VPS16-203ENST00000380469 WNK3Q9BYP7 1800 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 ORC4O43929 436 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 TRAPPC10P48553 1259 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 PPP2R3AQ06190 1150 aa18.52■□□□□ 0.56
VPS16-203ENST00000380469 CRNKL1Q9BZJ0 848 aaKnown RBP18.52■□□□□ 0.56
VPS16-203ENST00000380469 THRAP3Q9Y2W1 955 aaKnown RBP18.52■□□□□ 0.56
VPS16-203ENST00000380469 CNTNAP5Q8WYK1 1306 aa18.52■□□□□ 0.55
VPS16-203ENST00000380469 WNT7AO00755 349 aa18.51■□□□□ 0.55
VPS16-203ENST00000380469 KARSQ15046 597 aaKnown RBP18.51■□□□□ 0.55
VPS16-203ENST00000380469 SRBD1Q8N5C6 995 aaKnown RBP18.51■□□□□ 0.55
VPS16-203ENST00000380469 CPLX3Q8WVH0 158 aa18.51■□□□□ 0.55
VPS16-203ENST00000380469 RREB1Q92766 1687 aa18.51■□□□□ 0.55
VPS16-203ENST00000380469 SOWAHDA6NJG2 315 aa18.51■□□□□ 0.55
VPS16-203ENST00000380469 PNMA6AP0CW24 399 aaPredicted RBP18.51■□□□□ 0.55
VPS16-203ENST00000380469 SCG2P13521 617 aa18.51■□□□□ 0.55
VPS16-203ENST00000380469 GTF2E1P29083 439 aaPredicted RBP18.51■□□□□ 0.55
VPS16-203ENST00000380469 NPY5RQ15761 445 aa18.51■□□□□ 0.55
VPS16-203ENST00000380469 SMYD4Q8IYR2 804 aaPredicted RBP18.51■□□□□ 0.55
VPS16-203ENST00000380469 GPR161Q8N6U8 529 aaKnown RBP18.51■□□□□ 0.55
VPS16-203ENST00000380469 KIFC2Q96AC6 838 aa18.51■□□□□ 0.55
VPS16-203ENST00000380469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
VPS16-203ENST00000380469 MYH14Q7Z406 1995 aaKnown RBP18.5■□□□□ 0.55
VPS16-203ENST00000380469 PBX1P40424 430 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 NOM1Q5C9Z4 860 aaKnown RBP18.5■□□□□ 0.55
VPS16-203ENST00000380469 PIK3AP1Q6ZUJ8 805 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 C3orf67Q6ZVT6 689 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 FBXO33Q7Z6M2 555 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 ZNF384Q8TF68 577 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 CCDC12Q8WUD4 166 aaPredicted RBP18.5■□□□□ 0.55
VPS16-203ENST00000380469 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
VPS16-203ENST00000380469 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
VPS16-203ENST00000380469 CTNND2Q9UQB3 1225 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 ZRANB2O95218 330 aaKnown RBP eCLIP18.5■□□□□ 0.55
VPS16-203ENST00000380469 FAM193AP78312 1265 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 MECOMQ03112 1051 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 MTF1Q14872 753 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 CNGA4Q8IV77 575 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 MARCH10Q8NA82 808 aaPredicted RBP18.5■□□□□ 0.55
VPS16-203ENST00000380469 ATP8A2Q9NTI2 1148 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 SPATA31A1Q5TZJ5 1347 aa18.5■□□□□ 0.55
VPS16-203ENST00000380469 DLEC1Q9Y238 1755 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 COL4A1P02462 1669 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 ATP8B1O43520 1251 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 FAM47AQ5JRC9 791 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 RRAGBQ5VZM2 374 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 STAMQ92783 540 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 CCDC51Q96ER9 411 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 MRPL44Q9H9J2 332 aaKnown RBP18.49■□□□□ 0.55
VPS16-203ENST00000380469 ADGRG1Q9Y653 693 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 MFAP3LO75121 409 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 KIF5BP33176 963 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 MCM7P33993 719 aa18.49■□□□□ 0.55
VPS16-203ENST00000380469 PFKFB3Q16875 520 aaPredicted RBP18.49■□□□□ 0.55
VPS16-203ENST00000380469 DCP1AQ9NPI6 582 aaPredicted RBP18.49■□□□□ 0.55
VPS16-203ENST00000380469 GTPBP6O43824 516 aaPredicted RBP18.48■□□□□ 0.55
VPS16-203ENST00000380469 KIF5CO60282 957 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 NMT2O60551 498 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 E2F4Q16254 413 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 TEX35Q5T0J7 233 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 RAD9BQ6WBX8 426 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 ANKRD20A12PQ8NF67 263 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 BLZF1Q9H2G9 400 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 LZTFL1Q9NQ48 299 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 RMND1Q9NWS8 449 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 ITIH6Q6UXX5 1313 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 COL16A1Q07092 1604 aaPredicted RBP18.48■□□□□ 0.55
VPS16-203ENST00000380469 CALML3P27482 149 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 CASP14P31944 242 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 GOLGA1Q92805 767 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 CELF1Q92879 486 aaKnown RBP18.48■□□□□ 0.55
VPS16-203ENST00000380469 ARPP21Q9UBL0 812 aaPredicted RBP18.48■□□□□ 0.55
VPS16-203ENST00000380469 RWDD2AQ9UIY3 292 aa18.48■□□□□ 0.55
VPS16-203ENST00000380469 XDHP47989 1333 aa18.47■□□□□ 0.55
VPS16-203ENST00000380469 TSPY2A6NKD2 308 aa18.47■□□□□ 0.55
VPS16-203ENST00000380469 HIBADHP31937 336 aaKnown RBP18.47■□□□□ 0.55
VPS16-203ENST00000380469 TXLNAP40222 546 aa18.47■□□□□ 0.55
VPS16-203ENST00000380469 SPAG1Q07617 926 aa18.47■□□□□ 0.55
VPS16-203ENST00000380469 PDXDC2PQ6P474 469 aa18.47■□□□□ 0.55
VPS16-203ENST00000380469 RSRC2Q7L4I2 434 aaKnown RBP18.47■□□□□ 0.55
VPS16-203ENST00000380469 RABGGTAQ92696 567 aa18.47■□□□□ 0.55
VPS16-203ENST00000380469 LIMA1Q9UHB6 759 aaKnown RBP18.47■□□□□ 0.55
VPS16-203ENST00000380469 N4BP3O15049 544 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 CREBRFQ8IUR6 639 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 ST7Q9NRC1 585 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 PDS5AQ29RF7 1337 aaKnown RBP18.46■□□□□ 0.55
VPS16-203ENST00000380469 A0A1B0GUL6 1792 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 LONP1P36776 959 aaKnown RBP18.46■□□□□ 0.55
VPS16-203ENST00000380469 CCT6AP40227 531 aaKnown RBP18.46■□□□□ 0.55
VPS16-203ENST00000380469 PLA2G4AP47712 749 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 PAK1Q13153 545 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 KRT31Q15323 416 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 SBK1Q52WX2 424 aa18.46■□□□□ 0.55
VPS16-203ENST00000380469 ARL6IP4Q66PJ3 421 aaKnown RBP18.46■□□□□ 0.55
VPS16-203ENST00000380469 RASGRP2Q7LDG7 609 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms