RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CCDC34Q96HJ3 373 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 CLIC6Q96NY7 704 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 ZC3H12CQ9C0D7 883 aaKnown RBP26.49■■□□□ 1.83
VPS16-201ENST00000380443 PCDHB6Q9Y5E3 794 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 RHBDL3P58872 404 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 MPNDQ8N594 471 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 TNFRSF25Q93038 417 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 FERMT2Q96AC1 680 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 DYNLL2Q96FJ2 89 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 DDX60LQ5H9U9 1706 aaKnown RBP26.48■■□□□ 1.83
VPS16-201ENST00000380443 CNNM3Q8NE01 707 aa26.48■■□□□ 1.83
VPS16-201ENST00000380443 MASTLQ96GX5 879 aa26.48■■□□□ 1.83
VPS16-201ENST00000380443 RASA1P20936 1047 aa26.47■■□□□ 1.83
VPS16-201ENST00000380443 GALNT17Q6IS24 598 aa26.47■■□□□ 1.83
VPS16-201ENST00000380443 NEDD1Q8NHV4 660 aa26.47■■□□□ 1.83
VPS16-201ENST00000380443 SHISA4Q96DD7 197 aa26.47■■□□□ 1.83
VPS16-201ENST00000380443 CDK5RAP2Q96SN8 1893 aa26.47■■□□□ 1.83
VPS16-201ENST00000380443 FLT1P17948 1338 aa26.47■■□□□ 1.83
VPS16-201ENST00000380443 IKBKBO14920 756 aa26.46■■□□□ 1.83
VPS16-201ENST00000380443 PLCD1P51178 756 aa26.46■■□□□ 1.83
VPS16-201ENST00000380443 DRC7Q8IY82 874 aa26.46■■□□□ 1.83
VPS16-201ENST00000380443 EYA3Q99504 573 aa26.46■■□□□ 1.83
VPS16-201ENST00000380443 CDK8P49336 464 aa26.46■■□□□ 1.83
VPS16-201ENST00000380443 NLRP5P59047 1200 aa26.46■■□□□ 1.83
VPS16-201ENST00000380443 TTC12Q9H892 705 aaPredicted RBP26.46■■□□□ 1.83
VPS16-201ENST00000380443 MYO1BO43795 1136 aa26.45■■□□□ 1.82
VPS16-201ENST00000380443 SMARCA1P28370 1054 aa26.45■■□□□ 1.82
VPS16-201ENST00000380443 GTF2IP78347 998 aa26.45■■□□□ 1.82
VPS16-201ENST00000380443 NPY5RQ15761 445 aa26.45■■□□□ 1.82
VPS16-201ENST00000380443 AOPEPQ8N6M6 819 aa26.45■■□□□ 1.82
VPS16-201ENST00000380443 DPCR1Q3MIW9 517 aa26.44■■□□□ 1.82
VPS16-201ENST00000380443 DPP8Q6V1X1 898 aaPredicted RBP26.44■■□□□ 1.82
VPS16-201ENST00000380443 SPC24Q8NBT2 197 aa26.44■■□□□ 1.82
VPS16-201ENST00000380443 LONRF3Q496Y0 759 aa26.44■■□□□ 1.82
VPS16-201ENST00000380443 FHDC1Q9C0D6 1143 aaPredicted RBP26.44■■□□□ 1.82
VPS16-201ENST00000380443 CLIP2Q9UDT6 1046 aa26.44■■□□□ 1.82
VPS16-201ENST00000380443 SAP30BPQ9UHR5 308 aaKnown RBP26.44■■□□□ 1.82
VPS16-201ENST00000380443 DAGLAQ9Y4D2 1042 aa26.44■■□□□ 1.82
VPS16-201ENST00000380443 FOCADQ5VW36 1801 aa26.43■■□□□ 1.82
VPS16-201ENST00000380443 NEMFO60524 1076 aa26.43■■□□□ 1.82
VPS16-201ENST00000380443 DHX8Q14562 1220 aaKnown RBP26.43■■□□□ 1.82
VPS16-201ENST00000380443 CCDC148Q8NFR7 591 aa26.43■■□□□ 1.82
VPS16-201ENST00000380443 TMEM47Q9BQJ4 181 aa26.43■■□□□ 1.82
VPS16-201ENST00000380443 SPTLC3Q9NUV7 552 aa26.43■■□□□ 1.82
VPS16-201ENST00000380443 MAD2L2Q9UI95 211 aa26.43■■□□□ 1.82
VPS16-201ENST00000380443 PALM3A6NDB9 673 aaPredicted RBP26.42■■□□□ 1.82
VPS16-201ENST00000380443 NOVP48745 357 aa26.42■■□□□ 1.82
VPS16-201ENST00000380443 TTC38Q5R3I4 469 aa26.42■■□□□ 1.82
VPS16-201ENST00000380443 ERCC4Q92889 916 aaPredicted RBP26.42■■□□□ 1.82
VPS16-201ENST00000380443 PYM1Q9BRP8 204 aaKnown RBP26.42■■□□□ 1.82
VPS16-201ENST00000380443 hCG_1642624A0A1W2PR95 340 aa26.42■■□□□ 1.82
VPS16-201ENST00000380443 USP17L3A6NCW0 530 aa26.42■■□□□ 1.82
VPS16-201ENST00000380443 USP17L4A6NCW7 530 aa26.42■■□□□ 1.82
VPS16-201ENST00000380443 MDM2Q00987 491 aaPredicted RBP26.42■■□□□ 1.82
VPS16-201ENST00000380443 OLFM4Q6UX06 510 aa26.42■■□□□ 1.82
VPS16-201ENST00000380443 USP17L1Q7RTZ2 530 aa26.42■■□□□ 1.82
VPS16-201ENST00000380443 METTL16Q86W50 562 aaKnown RBP26.42■■□□□ 1.82
VPS16-201ENST00000380443 TRIML1Q8N9V2 468 aa26.42■■□□□ 1.82
VPS16-201ENST00000380443 ZNF830Q96NB3 372 aaPredicted RBP26.42■■□□□ 1.82
VPS16-201ENST00000380443 NAP1L5Q96NT1 182 aaPredicted RBP26.42■■□□□ 1.82
VPS16-201ENST00000380443 MYH1P12882 1939 aa26.41■■□□□ 1.82
VPS16-201ENST00000380443 TOP1P11387 765 aaKnown RBP26.41■■□□□ 1.82
VPS16-201ENST00000380443 NOLC1Q14978 699 aaKnown RBP eCLIP26.41■■□□□ 1.82
VPS16-201ENST00000380443 NT5DC1Q5TFE4 455 aa26.41■■□□□ 1.82
VPS16-201ENST00000380443 DAGLBQ8NCG7 672 aa26.41■■□□□ 1.82
VPS16-201ENST00000380443 CD2APQ9Y5K6 639 aa26.41■■□□□ 1.82
VPS16-201ENST00000380443 PLIN4Q96Q06 1357 aa26.41■■□□□ 1.82
VPS16-201ENST00000380443 RIMBP2O15034 1052 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 FKBP1AP62942 108 aaKnown RBP26.4■■□□□ 1.82
VPS16-201ENST00000380443 HHIPL2Q6UWX4 724 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 KIAA1524Q8TCG1 905 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 SYT17Q9BSW7 474 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 MRIQ9BWK5 157 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 SPZ1Q9BXG8 430 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 PCDHA4Q9UN74 947 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 MYO3BQ8WXR4 1341 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 SNED1Q8TER0 1413 aa26.4■■□□□ 1.82
VPS16-201ENST00000380443 ATP2C1P98194 919 aaPredicted RBP26.39■■□□□ 1.82
VPS16-201ENST00000380443 SLC4A8Q2Y0W8 1093 aa26.39■■□□□ 1.82
VPS16-201ENST00000380443 STYK1Q6J9G0 422 aa26.39■■□□□ 1.82
VPS16-201ENST00000380443 CCDC186Q7Z3E2 898 aa26.39■■□□□ 1.82
VPS16-201ENST00000380443 PODNQ7Z5L7 613 aa26.39■■□□□ 1.82
VPS16-201ENST00000380443 BLIDQ8IZY5 108 aa26.39■■□□□ 1.82
VPS16-201ENST00000380443 CSRNP2Q9H175 543 aa26.39■■□□□ 1.82
VPS16-201ENST00000380443 DACH1Q9UI36 760 aa26.39■■□□□ 1.82
VPS16-201ENST00000380443 STX8Q9UNK0 236 aa26.39■■□□□ 1.82
VPS16-201ENST00000380443 ATP2B1P20020 1258 aa26.39■■□□□ 1.81
VPS16-201ENST00000380443 POSTNQ15063 836 aa26.39■■□□□ 1.81
VPS16-201ENST00000380443 CT47A1Q5JQC4 288 aaPredicted RBP26.39■■□□□ 1.81
VPS16-201ENST00000380443 SLC44A5Q8NCS7 719 aa26.39■■□□□ 1.81
VPS16-201ENST00000380443 KCNF1Q9H3M0 494 aa26.39■■□□□ 1.81
VPS16-201ENST00000380443 SWAP70Q9UH65 585 aa26.39■■□□□ 1.81
VPS16-201ENST00000380443 BIN1O00499 593 aa26.38■■□□□ 1.81
VPS16-201ENST00000380443 POLR2DO15514 142 aaKnown RBP26.38■■□□□ 1.81
VPS16-201ENST00000380443 PNOCQ13519 176 aa26.38■■□□□ 1.81
VPS16-201ENST00000380443 EARS2Q5JPH6 523 aaKnown RBP26.38■■□□□ 1.81
VPS16-201ENST00000380443 CCDC12Q8WUD4 166 aaPredicted RBP26.38■■□□□ 1.81
VPS16-201ENST00000380443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.37■■□□□ 1.81
VPS16-201ENST00000380443 G3V3G9 751 aa26.37■■□□□ 1.81
VPS16-201ENST00000380443 PTGS1P23219 599 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms