RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SWAP70Q9UH65 585 aa22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 SIPA1L1O43166 1804 aa22.85■■□□□ 1.25
PDLIM5-205ENST00000380180 HLA-DOAP06340 250 aa22.85■■□□□ 1.25
PDLIM5-205ENST00000380180 TOP1P11387 765 aaKnown RBP22.85■■□□□ 1.25
PDLIM5-205ENST00000380180 AKR1B1P15121 316 aa22.85■■□□□ 1.25
PDLIM5-205ENST00000380180 CMA1P23946 247 aa22.85■■□□□ 1.25
PDLIM5-205ENST00000380180 NPY5RQ15761 445 aa22.85■■□□□ 1.25
PDLIM5-205ENST00000380180 PLIN4Q96Q06 1357 aa22.85■■□□□ 1.25
PDLIM5-205ENST00000380180 MYH4Q9Y623 1939 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 CTAGE5O15320 804 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 ZBTB7AO95365 584 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 UVSSAQ2YD98 709 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 MRVI1Q9Y6F6 885 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 SHMT1P34896 483 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 TCP10Q12799 353 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 SLC35G1Q2M3R5 365 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 CCDC125Q86Z20 511 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 IDI2Q9BXS1 227 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 BRMS1Q9HCU9 246 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 MTMR4Q9NYA4 1195 aa22.84■■□□□ 1.25
PDLIM5-205ENST00000380180 CYTH3O43739 400 aa22.83■■□□□ 1.25
PDLIM5-205ENST00000380180 GOLGA8HP0CJ92 632 aa22.83■■□□□ 1.25
PDLIM5-205ENST00000380180 EARS2Q5JPH6 523 aaKnown RBP22.83■■□□□ 1.25
PDLIM5-205ENST00000380180 RASGRP2Q7LDG7 609 aa22.83■■□□□ 1.25
PDLIM5-205ENST00000380180 ZNF277Q9NRM2 450 aaPredicted RBP22.83■■□□□ 1.25
PDLIM5-205ENST00000380180 FAM198AQ9UFP1 575 aa22.83■■□□□ 1.25
PDLIM5-205ENST00000380180 PCDHB6Q9Y5E3 794 aa22.83■■□□□ 1.25
PDLIM5-205ENST00000380180 FAM205CA6NFA0 338 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 SASS6Q6UVJ0 657 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 GREB1LQ9C091 1923 aaPredicted RBP22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 MYO3BQ8WXR4 1341 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 KLRF2D3W0D1 207 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 ATP2B1P20020 1258 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 NLRP5P59047 1200 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 LARGE2Q8N3Y3 721 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 CLIC6Q96NY7 704 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 LZTS2Q9BRK4 669 aa22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 ATF5Q9Y2D1 282 aaPredicted RBP22.82■■□□□ 1.24
PDLIM5-205ENST00000380180 IGKV6D-41A0A0C4DH26 115 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 PARP1P09874 1014 aaKnown RBP22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 SLURP2P0DP57 97 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 PFKFB1P16118 471 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 USP17L2Q6R6M4 530 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 SHC4Q6S5L8 630 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 TNFRSF25Q93038 417 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 EHD4Q9H223 541 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 DHX36Q9H2U1 1008 aaKnown RBP22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 DDTLA6NHG4 134 aaPredicted RBP22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 CUTAO60888 179 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 ZNF202O95125 648 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 CFAP100Q494V2 611 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 PDLIM2Q96JY6 352 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 TDRD3Q9H7E2 651 aaKnown RBP22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 SH3GLB2Q9NR46 395 aa22.81■■□□□ 1.24
PDLIM5-205ENST00000380180 COL4A5P29400 1685 aa22.8■■□□□ 1.24
PDLIM5-205ENST00000380180 GPKOWQ92917 476 aaPredicted RBP eCLIP22.8■■□□□ 1.24
PDLIM5-205ENST00000380180 SDF4Q9BRK5 362 aa22.8■■□□□ 1.24
PDLIM5-205ENST00000380180 NPM3O75607 178 aaKnown RBP22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 RAD17O75943 681 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 TGFB2P61812 414 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 ANO6Q4KMQ2 910 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 NOM1Q5C9Z4 860 aaKnown RBP22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 SH3BP5LQ7L8J4 393 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 KRI1Q8N9T8 703 aaKnown RBP22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 PRMT6Q96LA8 375 aaPredicted RBP22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 CPVLQ9H3G5 476 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 PIM2Q9P1W9 311 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 PI4KBQ9UBF8 816 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 EIF6P56537 245 aaKnown RBP22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 RESP18Q5W5W9 173 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 RSBN1LQ6PCB5 846 aaPredicted RBP22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 CLEC10AQ8IUN9 316 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 SPZ1Q9BXG8 430 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 DNAJC18Q9H819 358 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 HPSEQ9Y251 543 aa22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 BRCA1P38398 1863 aaKnown RBP22.79■■□□□ 1.24
PDLIM5-205ENST00000380180 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.78■■□□□ 1.24
PDLIM5-205ENST00000380180 USP17L5A8MUK1 530 aa22.78■■□□□ 1.24
PDLIM5-205ENST00000380180 PSMD14O00487 310 aa22.78■■□□□ 1.24
PDLIM5-205ENST00000380180 ADAMTS3O15072 1205 aa22.78■■□□□ 1.24
PDLIM5-205ENST00000380180 ZSCAN29Q8IWY8 852 aaPredicted RBP22.78■■□□□ 1.24
PDLIM5-205ENST00000380180 FAM200AQ8TCP9 573 aa22.78■■□□□ 1.24
PDLIM5-205ENST00000380180 CLIP2Q9UDT6 1046 aa22.78■■□□□ 1.24
PDLIM5-205ENST00000380180 CEP131Q9UPN4 1083 aa22.78■■□□□ 1.24
PDLIM5-205ENST00000380180 TRIM75PA6NK02 468 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 TTLL1O95922 423 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 VIL1P09327 827 aaKnown RBP22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 CALML3P27482 149 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 LRRC47Q8N1G4 583 aaKnown RBP22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 TRIM44Q96DX7 344 aaPredicted RBP22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 FBXO2Q9UK22 296 aaPredicted RBP22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 FAM237AA0A1B0GTK4 181 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 MPHOSPH10O00566 681 aaKnown RBP22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 PDHBP11177 359 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 PTPREP23469 700 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 SOGA3Q5TF21 947 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 WWC2Q6AWC2 1192 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 TYW1BQ6NUM6 668 aa22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 ERCC4Q92889 916 aaPredicted RBP22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 VPS33BQ9H267 617 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 869.6 ms