RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 NR5A1Q13285 461 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 CLEC10AQ8IUN9 316 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 BICD2Q8TD16 824 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 PI4KBQ9UBF8 816 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 PCDHA7Q9UN72 937 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 FAM196BA6NMK8 535 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 STK38Q15208 465 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 PFKFB3Q16875 520 aaPredicted RBP20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 PIBF1Q8WXW3 757 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 DACT1Q9NYF0 836 aa20.04■□□□□ 0.8
THUMPD2-201ENST00000378727 ATRNL1Q5VV63 1379 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 CYTH3O43739 400 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 ENTPD3O75355 529 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 SCG2P13521 617 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 XBP1P17861 261 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 ME1P48163 572 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 GNAQP50148 359 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 NPY5RQ15761 445 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 BCS1LQ9Y276 419 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 SPTLC2O15270 562 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 NR1I2O75469 434 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 GOLGA8HP0CJ92 632 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 SF3A1Q15459 793 aaKnown RBP20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 ZSCAN29Q8IWY8 852 aaPredicted RBP20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 AGBL3Q8NEM8 1001 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 KCNG4Q8TDN1 519 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 HDAC9Q9UKV0 1011 aa20.03■□□□□ 0.8
THUMPD2-201ENST00000378727 TOB1P50616 345 aaPredicted RBP20.02■□□□□ 0.8
THUMPD2-201ENST00000378727 PTPAQ15257 358 aa20.02■□□□□ 0.8
THUMPD2-201ENST00000378727 OGFOD1Q8N543 542 aa20.02■□□□□ 0.8
THUMPD2-201ENST00000378727 RBSNQ9H1K0 784 aa20.02■□□□□ 0.8
THUMPD2-201ENST00000378727 GOLPH3LQ9H4A5 285 aa20.02■□□□□ 0.8
THUMPD2-201ENST00000378727 COL2A1P02458 1487 aaPredicted RBP20.02■□□□□ 0.8
THUMPD2-201ENST00000378727 EIF6P56537 245 aaKnown RBP20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 SLC39A14Q15043 492 aa20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 DLGAP5Q15398 846 aa20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 USP17L2Q6R6M4 530 aa20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 METTL16Q86W50 562 aaKnown RBP20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 CCAR1Q8IX12 1150 aaKnown RBP20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 PANK2Q9BZ23 570 aa20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 KLRF2D3W0D1 207 aa20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 LETM1O95202 739 aaPredicted RBP20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 PARP1P09874 1014 aaKnown RBP20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 ADALQ6DHV7 355 aa20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 FOXP4Q8IVH2 680 aaPredicted RBP20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 LRRC47Q8N1G4 583 aaKnown RBP20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 CCDC17Q96LX7 622 aa20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 ZNF70Q9UC06 446 aaPredicted RBP20.01■□□□□ 0.79
THUMPD2-201ENST00000378727 MYH4Q9Y623 1939 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 CLRN2A0PK11 232 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 USP17L5A8MUK1 530 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 TTLL1O95922 423 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 KRT2P35908 639 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 SHROOM1Q2M3G4 852 aaPredicted RBP20■□□□□ 0.79
THUMPD2-201ENST00000378727 TATDN1Q6P1N9 297 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 NLGN2Q8NFZ4 835 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 JDP2Q8WYK2 163 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 LZTS2Q9BRK4 669 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 CPVLQ9H3G5 476 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 CLIP2Q9UDT6 1046 aa20■□□□□ 0.79
THUMPD2-201ENST00000378727 MPHOSPH10O00566 681 aaKnown RBP19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 PDHBP11177 359 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 CIAPIN1Q6FI81 312 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 TNFRSF25Q93038 417 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 NUP62CLQ9H1M0 184 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 DDX19AQ9NUU7 478 aaKnown RBP19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 ARFGEF1Q9Y6D6 1849 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 FAM205CA6NFA0 338 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 TCP10L2B9ZVM9 353 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 SPDYE2Q495Y8 402 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 EARS2Q5JPH6 523 aaKnown RBP19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 AXDND1Q5T1B0 1012 aaPredicted RBP19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 MTMR14Q8NCE2 650 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 SPZ1Q9BXG8 430 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 LTBP3Q9NS15 1303 aa19.99■□□□□ 0.79
THUMPD2-201ENST00000378727 A0A1W2PQ27 194 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 A0A1W2PQ64 194 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 A0A1W2PQD8 194 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 SNHG28P0DPA3 235 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 PRELPP51888 382 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 SNW1Q13573 536 aaKnown RBP19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 CAMK4Q16566 473 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 CERKLQ49MI3 558 aaPredicted RBP19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 RILPL1Q5EBL4 403 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 ENGASEQ8NFI3 743 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 GPKOWQ92917 476 aaPredicted RBP eCLIP19.98■□□□□ 0.798e-6■■■□□ 18.6
THUMPD2-201ENST00000378727 TSPY26PQ9H489 355 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 CLSTN2Q9H4D0 955 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 CABP5Q9NP86 173 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 TMOD2Q9NZR1 351 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 CNTNAP1P78357 1384 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 ADAMTS3O15072 1205 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 MARCKSP29966 332 aaPredicted RBP19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 RASSF7Q02833 373 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 FSIP1Q8NA03 581 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 ZBED3Q96IU2 234 aaPredicted RBP19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 FUCA2Q9BTY2 467 aa19.98■□□□□ 0.79
THUMPD2-201ENST00000378727 SHTN1A0MZ66 631 aa19.97■□□□□ 0.79
THUMPD2-201ENST00000378727 PPP6R2O75170 966 aa19.97■□□□□ 0.79
THUMPD2-201ENST00000378727 TYW1BQ6NUM6 668 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms