RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SLC9C1Q4G0N8 1177 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 ARMC9Q7Z3E5 817 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 MSANTD4Q8NCY6 345 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 CABS1Q96KC9 395 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 RNF181Q9P0P0 153 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 CAPN7Q9Y6W3 813 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 MAP3K19Q56UN5 1328 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 ZBBXA8MT70 800 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 TAF5LO75529 589 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 PRDM1O75626 825 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 GNGT1P63211 74 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 PTH1RQ03431 593 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 PAK2Q13177 524 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 TAOK1Q7L7X3 1001 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 DCAF5Q96JK2 942 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 PPANQ9NQ55 473 aaKnown RBP13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 GUCY2FP51841 1108 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 BIRC3Q13489 604 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 KIAA0825Q8IV33 1275 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 MIPOL1Q8TD10 442 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 MGARPQ8TDB4 240 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 CFAP65Q6ZU64 1925 aaKnown RBP13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 ADGBQ8N7X0 1667 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 MAP2K2P36507 400 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 SEPT14Q6ZU15 432 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 NELFCDQ8IXH7 590 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 PRPF38AQ8NAV1 312 aaKnown RBP13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 FTOQ9C0B1 505 aaKnown RBP eCLIP13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 PFKFB1P16118 471 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 SEPT12Q8IYM1 358 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 LGR6Q9HBX8 967 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 SFMBT2Q5VUG0 894 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 RUFY4Q6ZNE9 571 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 CABP7Q86V35 215 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 AATFQ9NY61 560 aaKnown RBP eCLIP13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 STK38LQ9Y2H1 464 aa13.27□□□□□ -0.28
PCDHA9-201ENST00000378122 GCC2Q8IWJ2 1684 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 CCDC169A6NNP5 214 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 RAD51AP2Q09MP3 1159 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 PPFIA1Q13136 1202 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 BRD3Q15059 726 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 LRFN2Q9ULH4 789 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 PYCARDQ9ULZ3 195 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 INF2Q27J81 1249 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 GAS2L3Q86XJ1 694 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 PLCB1Q9NQ66 1216 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 IRAK4Q9NWZ3 460 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 PALD1Q9ULE6 856 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 ZWINTO95229 277 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 MAGEA1P43355 309 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 IGBP1P78318 339 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 VPS54Q9P1Q0 977 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 USTQ9Y2C2 406 aa13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 FNDC3AQ9Y2H6 1198 aaKnown RBP13.27□□□□□ -0.29
PCDHA9-201ENST00000378122 HIBADHP31937 336 aaKnown RBP13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 TSNAXIP1Q2TAA8 658 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 FMNL3Q8IVF7 1028 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 FLAD1Q8NFF5 587 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 FNBP1Q96RU3 617 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 TSTA3Q13630 321 aaPredicted RBP13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 GEN1Q17RS7 908 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 CMTR1Q8N1G2 835 aaKnown RBP13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 AZI2Q9H6S1 392 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 PFDN4Q9NQP4 134 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 ZNF518AQ6AHZ1 1483 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 GNL1P36915 607 aaPredicted RBP13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 ZAP70P43403 619 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 KBTBD3Q8NAB2 608 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 IP6K1Q92551 441 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 PPP2R2CQ9Y2T4 447 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 CCDC14Q49A88 953 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 SNX29Q8TEQ0 813 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 MYO1AQ9UBC5 1043 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 TPCN1Q9ULQ1 816 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 ZNF532Q9HCE3 1301 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 GOLGA8KD6RF30 607 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 ZNF365Q70YC5 407 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 RRAGAQ7L523 313 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 LSM14BQ9BX40 385 aaKnown RBP13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 CTTNBP2NLQ9P2B4 639 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 ASIC3Q9UHC3 531 aa13.26□□□□□ -0.29
PCDHA9-201ENST00000378122 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 CALCRLQ16602 461 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 MCUR1Q96AQ8 359 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 EDC3Q96F86 508 aaKnown RBP13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 BAIAP2L1Q9UHR4 511 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 KCNJ18B7U540 433 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 KLHL30Q0D2K2 578 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 KCNJ12Q14500 433 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 C2orf69Q8N8R5 385 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 FAM207AQ9NSI2 230 aaPredicted RBP13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 ZNF215Q9UL58 517 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms