RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 MORF4L1Q9UBU8 362 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 ELNP15502 786 aa13.79□□□□□ -0.2
SMARCE1-203ENST00000377808 RASA1P20936 1047 aa13.79□□□□□ -0.2
SMARCE1-203ENST00000377808 KANSL2Q9H9L4 492 aa13.79□□□□□ -0.2
SMARCE1-203ENST00000377808 HELLSQ9NRZ9 838 aa13.79□□□□□ -0.2
SMARCE1-203ENST00000377808 ROBO3Q96MS0 1386 aa13.79□□□□□ -0.2
SMARCE1-203ENST00000377808 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 EN2P19622 333 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 PDE4BQ07343 736 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 PPARAQ07869 468 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 MTFR1Q15390 333 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 Q3C1V9 767 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 VCPKMTQ9H867 229 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 GOPCQ9HD26 462 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 RBPJLQ9UBG7 517 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 TMX2Q9Y320 296 aa13.78□□□□□ -0.2
SMARCE1-203ENST00000377808 SPDYE16A6NNV3 312 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 FLOT1O75955 427 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 TSPY3P0CV98 308 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 TSPY8P0CW00 308 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 MAPK4P31152 587 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 CCNA1P78396 465 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 KIAA1755Q5JYT7 1200 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 VPS53Q5VIR6 699 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 LPAR1Q92633 364 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 RNF208Q9H0X6 261 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 PORCNQ9H237 461 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 RABGAP1Q9Y3P9 1069 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 BRCA2P51587 3418 aa13.77□□□□□ -0.21
SMARCE1-203ENST00000377808 WDR46O15213 610 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 CNMDO75829 334 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 INHAP05111 366 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 CCL5P13501 91 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 CYP2B6P20813 491 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 CTDSPL2Q05D32 466 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 IRF5Q13568 498 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 PLS1Q14651 629 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 COG2Q14746 738 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 FAM47AQ5JRC9 791 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 SIAH1Q8IUQ4 282 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 NUDT12Q9BQG2 462 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 OSBPL3Q9H4L5 887 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 TOMM22Q9NS69 142 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 DIAPH3Q9NSV4 1193 aa13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-203ENST00000377808 SDSP20132 328 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 GPR142Q7Z601 462 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 PLEKHH3Q7Z736 793 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 ZNF589Q86UQ0 364 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 SOCS4Q8WXH5 440 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 HOXC10Q9NYD6 342 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 BTBD7Q9P203 1132 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 CLIP2Q9UDT6 1046 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 CCDC171Q6TFL3 1326 aa13.75□□□□□ -0.21
SMARCE1-203ENST00000377808 TSPY2A6NKD2 308 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 FOXP2O15409 715 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 MFAP1P55081 439 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 TFAP4Q01664 338 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 RRP12Q5JTH9 1297 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 FAM83BQ5T0W9 1011 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 POTEEQ6S8J3 1075 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 LRRC47Q8N1G4 583 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 PXYLP1Q8TE99 480 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 CHMP4CQ96CF2 233 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 ATG4CQ96DT6 458 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 CEP95Q96GE4 821 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 IVNS1ABPQ9Y6Y0 642 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 DOCK3Q8IZD9 2030 aa13.74□□□□□ -0.21
SMARCE1-203ENST00000377808 HIP1O00291 1037 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 HMGCRP04035 888 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 HSPD1P10809 573 aaKnown RBP13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 ZKSCAN1P17029 563 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 PDE4AP27815 886 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 DSG3P32926 999 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 RGS2P41220 211 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 HAND2P61296 217 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 LBX2Q6XYB7 198 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 GJD2Q9UKL4 321 aa13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 RBBP6Q7Z6E9 1792 aaKnown RBP13.73□□□□□ -0.21
SMARCE1-203ENST00000377808 TTLL1O95922 423 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 NDUFB10O96000 172 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 FGAP02671 866 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 NCAPG2Q86XI2 1143 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 TICAM2Q86XR7 235 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 MB21D1Q8N884 522 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 SPATC1LQ9H0A9 340 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 FBXO28Q9NVF7 368 aa13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms