RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 THSD7AQ9UPZ6 1657 aa27.4■■□□□ 1.98
SNX5-201ENST00000377759 NAA30Q147X3 362 aaPredicted RBP27.4■■□□□ 1.98
SNX5-201ENST00000377759 SH3RF3Q8TEJ3 882 aaPredicted RBP27.4■■□□□ 1.98
SNX5-201ENST00000377759 PAGE5Q96GU1 130 aa27.4■■□□□ 1.98
SNX5-201ENST00000377759 LEMD3Q9Y2U8 911 aa27.4■■□□□ 1.98
SNX5-201ENST00000377759 SBF2Q86WG5 1849 aa27.4■■□□□ 1.98
SNX5-201ENST00000377759 PTGDRQ13258 359 aa27.39■■□□□ 1.98
SNX5-201ENST00000377759 DYNLL2Q96FJ2 89 aa27.39■■□□□ 1.98
SNX5-201ENST00000377759 LDHBP07195 334 aaKnown RBP27.39■■□□□ 1.98
SNX5-201ENST00000377759 RFC4P35249 363 aa27.39■■□□□ 1.98
SNX5-201ENST00000377759 TFAP4Q01664 338 aa27.39■■□□□ 1.98
SNX5-201ENST00000377759 GOLGA8FQ08AF8 430 aa27.39■■□□□ 1.98
SNX5-201ENST00000377759 GOLGA8DPQ0D2H9 430 aa27.39■■□□□ 1.98
SNX5-201ENST00000377759 WDR66Q8TBY9 1149 aa27.39■■□□□ 1.98
SNX5-201ENST00000377759 CCDC94Q9BW85 323 aaPredicted RBP27.39■■□□□ 1.98
SNX5-201ENST00000377759 TOP1P11387 765 aaKnown RBP27.38■■□□□ 1.97
SNX5-201ENST00000377759 PLCD1P51178 756 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 NLRP5P59047 1200 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 TBX2Q13207 712 aaPredicted RBP27.38■■□□□ 1.97
SNX5-201ENST00000377759 TRAPPC3LQ5T215 181 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 KIF2AO00139 706 aaPredicted RBP27.38■■□□□ 1.97
SNX5-201ENST00000377759 CASP1P29466 404 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 AFMP43652 599 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 DIXDC1Q155Q3 683 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 GLIPR1L2Q4G1C9 344 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 PIK3AP1Q6ZUJ8 805 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 KIF18AQ8NI77 898 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 ANKS1AQ92625 1134 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 SAMSN1Q9NSI8 373 aaKnown RBP27.38■■□□□ 1.97
SNX5-201ENST00000377759 USP21Q9UK80 565 aa27.38■■□□□ 1.97
SNX5-201ENST00000377759 NPHP1O15259 732 aa27.37■■□□□ 1.97
SNX5-201ENST00000377759 ERCC5P28715 1186 aaPredicted RBP27.37■■□□□ 1.97
SNX5-201ENST00000377759 DGKHQ86XP1 1220 aa27.37■■□□□ 1.97
SNX5-201ENST00000377759 LY75O60449 1722 aa27.37■■□□□ 1.97
SNX5-201ENST00000377759 VWA3AA6NCI4 1184 aa27.37■■□□□ 1.97
SNX5-201ENST00000377759 TMEM139Q8IV31 216 aa27.37■■□□□ 1.97
SNX5-201ENST00000377759 PDCL2Q8N4E4 241 aa27.37■■□□□ 1.97
SNX5-201ENST00000377759 GPR101Q96P66 508 aaPredicted RBP27.37■■□□□ 1.97
SNX5-201ENST00000377759 NRDCO43847 1150 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 USP5P45974 858 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 DPYDQ12882 1025 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 IL17AQ16552 155 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 ROBO3Q96MS0 1386 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 CD44P16070 742 aaKnown RBP27.36■■□□□ 1.97
SNX5-201ENST00000377759 KIF5BP33176 963 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 TRAPPC10P48553 1259 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 PPP4CP60510 307 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 FAM196AQ6ZSG2 479 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 STAG2Q8N3U4 1231 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 KAT14Q9H8E8 782 aa27.36■■□□□ 1.97
SNX5-201ENST00000377759 XDHP47989 1333 aa27.35■■□□□ 1.97
SNX5-201ENST00000377759 IGSF3O75054 1194 aa27.35■■□□□ 1.97
SNX5-201ENST00000377759 CUL4BQ13620 913 aa27.34■■□□□ 1.97
SNX5-201ENST00000377759 E2F4Q16254 413 aa27.34■■□□□ 1.97
SNX5-201ENST00000377759 SLC35G1Q2M3R5 365 aa27.34■■□□□ 1.97
SNX5-201ENST00000377759 CNBD1Q8NA66 436 aa27.34■■□□□ 1.97
SNX5-201ENST00000377759 PNMA1Q8ND90 353 aa27.34■■□□□ 1.97
SNX5-201ENST00000377759 ZNF215Q9UL58 517 aaPredicted RBP27.34■■□□□ 1.97
SNX5-201ENST00000377759 CDK11BP21127 795 aaKnown RBP27.34■■□□□ 1.97
SNX5-201ENST00000377759 C15orf52Q6ZUT6 534 aaKnown RBP27.34■■□□□ 1.97
SNX5-201ENST00000377759 USP17L3A6NCW0 530 aa27.33■■□□□ 1.97
SNX5-201ENST00000377759 USP17L4A6NCW7 530 aa27.33■■□□□ 1.97
SNX5-201ENST00000377759 USP17L1Q7RTZ2 530 aa27.33■■□□□ 1.97
SNX5-201ENST00000377759 CT47A1Q5JQC4 288 aaPredicted RBP27.33■■□□□ 1.97
SNX5-201ENST00000377759 PPP4R3BQ5MIZ7 849 aa27.33■■□□□ 1.97
SNX5-201ENST00000377759 APTXQ7Z2E3 356 aaKnown RBP27.33■■□□□ 1.97
SNX5-201ENST00000377759 CCDC34Q96HJ3 373 aa27.33■■□□□ 1.97
SNX5-201ENST00000377759 FAM205AQ6ZU69 1335 aa27.33■■□□□ 1.96
SNX5-201ENST00000377759 MCM7P33993 719 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 NT5C2P49902 561 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 GRM4Q14833 912 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 NR1I3Q14994 352 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 PRR5LQ6MZQ0 368 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 TYW1BQ6NUM6 668 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 C4orf32Q8N8J7 132 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 SLC44A5Q8NCS7 719 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 TGFBRAP1Q8WUH2 860 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 GPKOWQ92917 476 aaPredicted RBP eCLIP27.32■■□□□ 1.969e-6■■□□□ 14.5
SNX5-201ENST00000377759 GSDMAQ96QA5 445 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 MAD2L2Q9UI95 211 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 GSTO1P78417 241 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 GPSM2P81274 684 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 SYT10Q6XYQ8 523 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 ZNF804AQ7Z570 1209 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 LRRC4BQ9NT99 713 aa27.32■■□□□ 1.96
SNX5-201ENST00000377759 BLIDQ8IZY5 108 aa27.31■■□□□ 1.96
SNX5-201ENST00000377759 SH3GLB2Q9NR46 395 aa27.31■■□□□ 1.96
SNX5-201ENST00000377759 TCP11L1Q9NUJ3 509 aa27.31■■□□□ 1.96
SNX5-201ENST00000377759 PPP1R3GB7ZBB8 358 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 UBAP1LF5GYI3 381 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 BAG3O95817 575 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 SPECC1LQ69YQ0 1117 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 TC2NQ8N9U0 490 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 MTRQ99707 1265 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 RTFDC1Q9BY42 306 aaPredicted RBP27.3■■□□□ 1.96
SNX5-201ENST00000377759 L2HGDHQ9H9P8 463 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 MKNK2Q9HBH9 465 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 CALML3P27482 149 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 SPATA1Q5VX52 437 aa27.3■■□□□ 1.96
SNX5-201ENST00000377759 PDXDC2PQ6P474 469 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms