RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	KCNA3	P22001	575 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	ZSCAN23	Q3MJ62	389 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	CLEC10A	Q8IUN9	316 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	ZFPM1	Q8IX07	1006 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	LEO1	Q8WVC0	666 aa	Predicted RBP	13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	CLIP2	Q9UDT6	1046 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	MKRN1	Q9UHC7	482 aa	Known RBP	13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	CAMK4	Q16566	473 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	GRIPAP1	Q4V328	841 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	LRRC47	Q8N1G4	583 aa	Known RBP	13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	PRMT6	Q96LA8	375 aa	Predicted RBP	13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	USP28	Q96RU2	1077 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	MTA3	Q9BTC8	594 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	ZNRF3	Q9ULT6	936 aa		13.41	□□□□□ -0.26
LMO7-204	ENST00000377499	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	C16orf86	Q6ZW13	317 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	ZDHHC15	Q96MV8	337 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	PLCD4	Q9BRC7	762 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	BRMS1	Q9HCU9	246 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	TMEM63C	Q9P1W3	806 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	SCAF8	Q9UPN6	1271 aa	Known RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	MYO1B	O43795	1136 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	DDAH1	O94760	285 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	CEP95	Q96GE4	821 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	IL17RB	Q9NRM6	502 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	COL11A2	P13942	1736 aa	Predicted RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	NLRP5	P59047	1200 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	IK	Q13123	557 aa	Predicted RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	CCDC96	Q2M329	555 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	ARHGAP27	Q6ZUM4	889 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	DGKH	Q86XP1	1220 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	DIS3L2	Q8IYB7	885 aa	Known RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	PSMD1	Q99460	953 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	TMEM47	Q9BQJ4	181 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	CPVL	Q9H3G5	476 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	CALCOCO1	Q9P1Z2	691 aa		13.4	□□□□□ -0.26
LMO7-204	ENST00000377499	C10orf71	Q711Q0	1435 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	BTBD18	B2RXH4	712 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	AKR1B1	P15121	316 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	TROAP	Q12815	778 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	NTRK3	Q16288	839 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	CIAPIN1	Q6FI81	312 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	PPP2R5B	Q15173	497 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	CSRNP1	Q96S65	589 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	SERPINA10	Q9UK55	444 aa		13.39	□□□□□ -0.27
LMO7-204	ENST00000377499	MARCKS	P29966	332 aa	Predicted RBP	13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	CCDC73	Q6ZRK6	1079 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	FAM212A	Q96EL1	285 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	GYS2	P54840	703 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	PLCB2	Q00722	1185 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	KIF23	Q02241	960 aa	Predicted RBP	13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	RASSF7	Q02833	373 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	USP17L2	Q6R6M4	530 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	HEATR3	Q7Z4Q2	680 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	STAG2	Q8N3U4	1231 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	GPCPD1	Q9NPB8	672 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	KIF28P	B7ZC32	967 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	GDF11	O95390	407 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	FGR	P09769	529 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	PARP1	P09874	1014 aa	Known RBP	13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	CXCL9	Q07325	125 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	CERKL	Q49MI3	558 aa	Predicted RBP	13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	MYSM1	Q5VVJ2	828 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	BRAP	Q7Z569	592 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	PI4KB	Q9UBF8	816 aa		13.38	□□□□□ -0.27
LMO7-204	ENST00000377499	DDTL	A6NHG4	134 aa	Predicted RBP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	SRBD1	Q8N5C6	995 aa	Known RBP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	NLGN2	Q8NFZ4	835 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	NEDD1	Q8NHV4	660 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	RNF26	Q9BY78	433 aa	Predicted RBP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	CLIC4	Q9Y696	253 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	CHD4	Q14839	1912 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	GNAQ	P50148	359 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	RCSD1	Q6JBY9	416 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	TMTC3	Q6ZXV5	915 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	RASGRP2	Q7LDG7	609 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	UBA5	Q9GZZ9	404 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	SRCAP	Q6ZRS2	3230 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	MYO3B	Q8WXR4	1341 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	KLRF2	D3W0D1	207 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	TOP1	P11387	765 aa	Known RBP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	NR5A1	Q13285	461 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	DNAJC21	Q5F1R6	531 aa	Known RBP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	C10orf67	Q8IYJ2	551 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	DHX36	Q9H2U1	1008 aa	Known RBP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	SPON1	Q9HCB6	807 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	CABP5	Q9NP86	173 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	DACT1	Q9NYF0	836 aa		13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	SEC63	Q9UGP8	760 aa	Known RBP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.37	□□□□□ -0.27
LMO7-204	ENST00000377499	TCHH	Q07283	1943 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	DUOX1	Q9NRD9	1551 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms