RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 FOXN1O15353 648 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 SRGNP10124 158 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 NPY5RQ15761 445 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 USP17L1Q7RTZ2 530 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 FOXP4Q8IVH2 680 aaPredicted RBP23.13■■□□□ 1.29
VSX1-202ENST00000376709 LRRC8AQ8IWT6 810 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 SP8Q8IXZ3 490 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 SLC44A5Q8NCS7 719 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 ZNF287Q9HBT7 754 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 TMC4Q7Z404 712 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 TEX11Q8IYF3 940 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 TNFRSF25Q93038 417 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 IFNKQ9P0W0 207 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 SERTAD1Q9UHV2 236 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 ATP6V0A2Q9Y487 856 aa23.13■■□□□ 1.29
VSX1-202ENST00000376709 GPR75-ASB3A0A0A6YYF3 556 aa23.12■■□□□ 1.29
VSX1-202ENST00000376709 NEMFO60524 1076 aa23.12■■□□□ 1.29
VSX1-202ENST00000376709 PLCG2P16885 1265 aa23.12■■□□□ 1.29
VSX1-202ENST00000376709 LMOD1P29536 600 aaPredicted RBP23.12■■□□□ 1.29
VSX1-202ENST00000376709 MDM2Q00987 491 aaPredicted RBP23.12■■□□□ 1.29
VSX1-202ENST00000376709 SLF2Q8IX21 1173 aa23.12■■□□□ 1.29
VSX1-202ENST00000376709 TBC1D22AQ8WUA7 517 aa23.12■■□□□ 1.29
VSX1-202ENST00000376709 XPO4Q9C0E2 1151 aaKnown RBP23.12■■□□□ 1.29
VSX1-202ENST00000376709 MORC2Q9Y6X9 1032 aaPredicted RBP23.12■■□□□ 1.29
VSX1-202ENST00000376709 RIMBP2O15034 1052 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 MYL5Q02045 173 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 TTC38Q5R3I4 469 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 FLAD1Q8NFF5 587 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 ANKS1AQ92625 1134 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 STX8Q9UNK0 236 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 PARP3Q9Y6F1 533 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 NPR1P16066 1061 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 NOM1Q5C9Z4 860 aaKnown RBP23.11■■□□□ 1.29
VSX1-202ENST00000376709 KANK3Q6NY19 840 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 USP49Q70CQ1 688 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 FERMT2Q96AC1 680 aa23.11■■□□□ 1.29
VSX1-202ENST00000376709 ARID5BQ14865 1188 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 ZNF174Q15697 407 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 TCP11L1Q9NUJ3 509 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 TNS1Q9HBL0 1735 aaKnown RBP23.1■■□□□ 1.29
VSX1-202ENST00000376709 PIK3AP1Q6ZUJ8 805 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 STAG2Q8N3U4 1231 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 SMARCE1Q969G3 411 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 CCDC34Q96HJ3 373 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 PRIMPOLQ96LW4 560 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 MTMR7Q9Y216 660 aa23.1■■□□□ 1.29
VSX1-202ENST00000376709 WNT7AO00755 349 aa23.09■■□□□ 1.29
VSX1-202ENST00000376709 VEGFAP15692 232 aaPredicted RBP23.09■■□□□ 1.29
VSX1-202ENST00000376709 RASA1P20936 1047 aa23.09■■□□□ 1.29
VSX1-202ENST00000376709 CALML3P27482 149 aa23.09■■□□□ 1.29
VSX1-202ENST00000376709 GNAQP50148 359 aa23.09■■□□□ 1.29
VSX1-202ENST00000376709 GRM4Q14833 912 aa23.09■■□□□ 1.29
VSX1-202ENST00000376709 COL11A2P13942 1736 aaPredicted RBP23.09■■□□□ 1.29
VSX1-202ENST00000376709 FLT1P17948 1338 aa23.09■■□□□ 1.29
VSX1-202ENST00000376709 ACTN4O43707 911 aaKnown RBP23.08■■□□□ 1.29
VSX1-202ENST00000376709 GSDMDP57764 484 aa23.08■■□□□ 1.29
VSX1-202ENST00000376709 EPSTI1Q96J88 318 aa23.08■■□□□ 1.29
VSX1-202ENST00000376709 IMPACTQ9P2X3 320 aa23.08■■□□□ 1.29
VSX1-202ENST00000376709 MAD2L2Q9UI95 211 aa23.08■■□□□ 1.29
VSX1-202ENST00000376709 PRR29P0C7W0 189 aa23.08■■□□□ 1.29
VSX1-202ENST00000376709 PDE6BP35913 854 aa23.08■■□□□ 1.29
VSX1-202ENST00000376709 GRAMD1CQ8IYS0 662 aa23.08■■□□□ 1.29
VSX1-202ENST00000376709 GPKOWQ92917 476 aaPredicted RBP eCLIP23.08■■□□□ 1.29
VSX1-202ENST00000376709 MAN1B1Q9UKM7 699 aa23.08■■□□□ 1.29
VSX1-202ENST00000376709 TRAPPC10P48553 1259 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 GTF2IP78347 998 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 FANCCQ00597 558 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 PTGDRQ13258 359 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 NT5DC1Q5TFE4 455 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 SYMPKQ92797 1274 aaKnown RBP23.07■■□□□ 1.28
VSX1-202ENST00000376709 DHX58Q96C10 678 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 FAM163AQ96GL9 167 aaPredicted RBP23.07■■□□□ 1.28
VSX1-202ENST00000376709 SKILP12757 684 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 ATP1A3P13637 1013 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 BMP6P22004 513 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 CDK8P49336 464 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 C16orf86Q6ZW13 317 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 EYA3Q99504 573 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 TMEM47Q9BQJ4 181 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 HSD3B7Q9H2F3 369 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 SH3GLB2Q9NR46 395 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 MYH1P12882 1939 aa23.07■■□□□ 1.28
VSX1-202ENST00000376709 DDX60LQ5H9U9 1706 aaKnown RBP23.06■■□□□ 1.28
VSX1-202ENST00000376709 VWA3AA6NCI4 1184 aa23.06■■□□□ 1.28
VSX1-202ENST00000376709 RHBDL3P58872 404 aa23.06■■□□□ 1.28
VSX1-202ENST00000376709 ATP2C1P98194 919 aaPredicted RBP23.06■■□□□ 1.28
VSX1-202ENST00000376709 TMC6Q7Z403 805 aa23.06■■□□□ 1.28
VSX1-202ENST00000376709 MYRIPQ8NFW9 859 aa23.06■■□□□ 1.28
VSX1-202ENST00000376709 OSBPL5Q9H0X9 879 aaPredicted RBP23.06■■□□□ 1.28
VSX1-202ENST00000376709 GAKO14976 1311 aa23.06■■□□□ 1.28
VSX1-202ENST00000376709 SERPINC1P01008 464 aa23.06■■□□□ 1.28
VSX1-202ENST00000376709 BLIDQ8IZY5 108 aa23.06■■□□□ 1.28
VSX1-202ENST00000376709 DACH1Q9UI36 760 aa23.06■■□□□ 1.28
VSX1-202ENST00000376709 FAM205AQ6ZU69 1335 aa23.05■■□□□ 1.28
VSX1-202ENST00000376709 ALDH1B1P30837 517 aa23.05■■□□□ 1.28
VSX1-202ENST00000376709 MCM7P33993 719 aa23.05■■□□□ 1.28
VSX1-202ENST00000376709 RBM10P98175 930 aaKnown RBP23.05■■□□□ 1.28
VSX1-202ENST00000376709 DPP8Q6V1X1 898 aaPredicted RBP23.05■■□□□ 1.28
VSX1-202ENST00000376709 MASTLQ96GX5 879 aa23.05■■□□□ 1.28
VSX1-202ENST00000376709 COA1Q9GZY4 146 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms