RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 KCTD19Q17RG1 926 aaPredicted RBP13.21□□□□□ -0.29
DDR1-227ENST00000376570 TDRD7Q8NHU6 1098 aaKnown RBP13.21□□□□□ -0.29
DDR1-227ENST00000376570 USP40Q9NVE5 1235 aa13.21□□□□□ -0.29
DDR1-227ENST00000376570 DACH1Q9UI36 760 aa13.21□□□□□ -0.29
DDR1-227ENST00000376570 TRIM49BA6NDI0 452 aa13.21□□□□□ -0.29
DDR1-227ENST00000376570 FOXP2O15409 715 aa13.21□□□□□ -0.29
DDR1-227ENST00000376570 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
DDR1-227ENST00000376570 ZNF569Q5MCW4 686 aa13.21□□□□□ -0.29
DDR1-227ENST00000376570 SLF1Q9BQI6 1058 aa13.21□□□□□ -0.29
DDR1-227ENST00000376570 DDX39AO00148 427 aaKnown RBP13.21□□□□□ -0.3
DDR1-227ENST00000376570 PARP1P09874 1014 aaKnown RBP13.21□□□□□ -0.3
DDR1-227ENST00000376570 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.3
DDR1-227ENST00000376570 MTF1Q14872 753 aa13.21□□□□□ -0.3
DDR1-227ENST00000376570 ANKRD13CQ8N6S4 541 aa13.21□□□□□ -0.3
DDR1-227ENST00000376570 CCDC43Q96MW1 224 aaKnown RBP13.21□□□□□ -0.3
DDR1-227ENST00000376570 BAG1Q99933 345 aaPredicted RBP13.21□□□□□ -0.3
DDR1-227ENST00000376570 CRACR2AQ9BSW2 395 aa13.21□□□□□ -0.3
DDR1-227ENST00000376570 HOMER2Q9NSB8 354 aa13.21□□□□□ -0.3
DDR1-227ENST00000376570 SMCO2A6NFE2 343 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
DDR1-227ENST00000376570 STIM1Q13586 685 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 MCM6Q14566 821 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
DDR1-227ENST00000376570 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 SRBD1Q8N5C6 995 aaKnown RBP13.2□□□□□ -0.3
DDR1-227ENST00000376570 PIGSQ96S52 555 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 RABEP2Q9H5N1 569 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 TMEM260Q9NX78 707 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 TEX33O43247 280 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 UBE4AQ14139 1066 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 AMIGO3Q86WK7 504 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDR1-227ENST00000376570 SLC39A2Q9NP94 309 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 MACROD2A1Z1Q3 448 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 SCG2P13521 617 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 IFNAR1P17181 557 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 TFR2Q9UP52 801 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 PXDNLA1KZ92 1463 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 SPATA31A1Q5TZJ5 1347 aa13.2□□□□□ -0.3
DDR1-227ENST00000376570 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
DDR1-227ENST00000376570 RTL9Q8NET4 1388 aa13.19□□□□□ -0.3
DDR1-227ENST00000376570 COL5A2P05997 1499 aaPredicted RBP13.19□□□□□ -0.3
DDR1-227ENST00000376570 IBSPP21815 317 aaPredicted RBP13.19□□□□□ -0.3
DDR1-227ENST00000376570 GSDMDP57764 484 aa13.19□□□□□ -0.3
DDR1-227ENST00000376570 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.33e-7■■■□□ 15.5
DDR1-227ENST00000376570 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
DDR1-227ENST00000376570 CCDC84Q86UT8 332 aaPredicted RBP13.19□□□□□ -0.3
DDR1-227ENST00000376570 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
DDR1-227ENST00000376570 IQUBQ8NA54 791 aa13.19□□□□□ -0.3
DDR1-227ENST00000376570 TACC3Q9Y6A5 838 aa13.19□□□□□ -0.3
DDR1-227ENST00000376570 PDE4DQ08499 809 aa13.19□□□□□ -0.3
DDR1-227ENST00000376570 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
DDR1-227ENST00000376570 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
DDR1-227ENST00000376570 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 CYP4A11Q02928 519 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 IQCB1Q15051 598 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 FEZ1Q99689 392 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 CENPHQ9H3R5 247 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 EXOC1Q9NV70 894 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 WNT7AO00755 349 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 GPSM2P81274 684 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 CPXCR1Q8N123 301 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
DDR1-227ENST00000376570 SRRTQ9BXP5 876 aaKnown RBP13.18□□□□□ -0.3
DDR1-227ENST00000376570 NFAT5O94916 1531 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 SOWAHDA6NJG2 315 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 CUL4BQ13620 913 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 BLIDQ8IZY5 108 aa13.18□□□□□ -0.3
DDR1-227ENST00000376570 FAM207AQ9NSI2 230 aaPredicted RBP13.18□□□□□ -0.3
DDR1-227ENST00000376570 CACNA2D4Q7Z3S7 1137 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 NELFBQ8WX92 580 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 ENC1O14682 589 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 CCDC40Q4G0X9 1142 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 NSUN4Q96CB9 384 aaKnown RBP13.17□□□□□ -0.3
DDR1-227ENST00000376570 ZNHIT6Q9NWK9 470 aaKnown RBP13.17□□□□□ -0.3
DDR1-227ENST00000376570 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 USP17L5A8MUK1 530 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 RAD17O75943 681 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 CCDC174Q6PII3 467 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 MIGA2Q7L4E1 593 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 KCNB2Q92953 911 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 CCDC102AQ96A19 550 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 NLRC4Q9NPP4 1024 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
DDR1-227ENST00000376570 LTN1O94822 1766 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 MEIS1O00470 390 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 KRT9P35527 623 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 DMTNQ08495 405 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 ACRBPQ8NEB7 543 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 JADE2Q9NQC1 790 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 ARGLU1Q9NWB6 273 aaPredicted RBP13.16□□□□□ -0.3
DDR1-227ENST00000376570 SEC31AO94979 1220 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms