RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 KIF13BQ9NQT8 1826 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 SPTLC2O15270 562 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 HLA-DOAP06340 250 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 RASSF7Q02833 373 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 SAFBQ15424 915 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLCN6-206ENST00000376496 CDAN1Q8IWY9 1227 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 FSIP1Q8NA03 581 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 ERCC4Q92889 916 aaPredicted RBP14.54□□□□□ -0.08
CLCN6-206ENST00000376496 UBA5Q9GZZ9 404 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 CABP5Q9NP86 173 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 CLIP2Q9UDT6 1046 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 NFKBIEO00221 500 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 KIF5BP33176 963 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 CXCL9Q07325 125 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 PPP2R5BQ15173 497 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 NUP62CLQ9H1M0 184 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 POLR3EQ9NVU0 708 aa14.54□□□□□ -0.08
CLCN6-206ENST00000376496 MYH8P13535 1937 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 A0A087WWV3 80 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 WNT7AO00755 349 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 RAD21O60216 631 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 HOMER1Q86YM7 354 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 CLIC6Q96NY7 704 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 SGIP1Q9BQI5 828 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 MTMR4Q9NYA4 1195 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 GDF11O95390 407 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 VIL1P09327 827 aaKnown RBP14.53□□□□□ -0.08
CLCN6-206ENST00000376496 SCG2P13521 617 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 NASPP49321 788 aaPredicted RBP14.53□□□□□ -0.08
CLCN6-206ENST00000376496 HDLBPQ00341 1268 aaKnown RBP14.53□□□□□ -0.08
CLCN6-206ENST00000376496 TYW1BQ6NUM6 668 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 MAP3K14Q99558 947 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 PHF20Q9BVI0 1012 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 TAOK3Q9H2K8 898 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 ZNRF3Q9ULT6 936 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 PCDHB6Q9Y5E3 794 aa14.53□□□□□ -0.08
CLCN6-206ENST00000376496 PTGER2P43116 358 aa14.52□□□□□ -0.08
CLCN6-206ENST00000376496 NPY5RQ15761 445 aa14.52□□□□□ -0.08
CLCN6-206ENST00000376496 SPECC1Q5M775 1068 aa14.52□□□□□ -0.08
CLCN6-206ENST00000376496 GMLQ99445 158 aa14.52□□□□□ -0.08
CLCN6-206ENST00000376496 IDI2Q9BXS1 227 aa14.52□□□□□ -0.08
CLCN6-206ENST00000376496 SIPA1L1O43166 1804 aa14.52□□□□□ -0.08
CLCN6-206ENST00000376496 TOP1P11387 765 aaKnown RBP14.52□□□□□ -0.09
CLCN6-206ENST00000376496 JAG1P78504 1218 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 RASGRP4Q8TDF6 673 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 MRIQ9BWK5 157 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 TNMDQ9H2S6 317 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 VEZTQ9HBM0 779 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 PALM3A6NDB9 673 aaPredicted RBP14.52□□□□□ -0.09
CLCN6-206ENST00000376496 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 PRELPP51888 382 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 GRIN1Q05586 938 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 PTPAQ15257 358 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.09
CLCN6-206ENST00000376496 ATL3Q6DD88 541 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 GPCPD1Q9NPB8 672 aa14.52□□□□□ -0.09
CLCN6-206ENST00000376496 YEATS4O95619 227 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 NDUFA8P51970 172 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 NLRP5P59047 1200 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 SNW1Q13573 536 aaKnown RBP14.51□□□□□ -0.09
CLCN6-206ENST00000376496 RRP1BQ14684 758 aaKnown RBP14.51□□□□□ -0.09
CLCN6-206ENST00000376496 SLC39A14Q15043 492 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 DLGAP5Q15398 846 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 PFKFB3Q16875 520 aaPredicted RBP14.51□□□□□ -0.09
CLCN6-206ENST00000376496 HEATR3Q7Z4Q2 680 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
CLCN6-206ENST00000376496 EGFRP00533 1210 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 PARP1P09874 1014 aaKnown RBP14.51□□□□□ -0.09
CLCN6-206ENST00000376496 KRT2P35908 639 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 CCDC178Q5BJE1 867 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 OGFOD1Q8N543 542 aa14.51□□□□□ -0.09
CLCN6-206ENST00000376496 FOXP1Q9H334 677 aaPredicted RBP14.51□□□□□ -0.09
CLCN6-206ENST00000376496 IGKV6D-41A0A0C4DH26 115 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 AXDND1Q5T1B0 1012 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-206ENST00000376496 CLSTN2Q9H4D0 955 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 PI4KBQ9UBF8 816 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 SWAP70Q9UH65 585 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 XBP1P17861 261 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 NBPF9Q3BBW0 867 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 WWC2Q6AWC2 1192 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 TTBK2Q6IQ55 1244 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 CCDC73Q6ZRK6 1079 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 KCNG4Q8TDN1 519 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 CSRNP1Q96S65 589 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 TRIM34Q9BYJ4 488 aa14.5□□□□□ -0.09
CLCN6-206ENST00000376496 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-206ENST00000376496 ZNF70Q9UC06 446 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-206ENST00000376496 PDHBP11177 359 aa14.49□□□□□ -0.09
CLCN6-206ENST00000376496 SEPT2Q15019 361 aa14.49□□□□□ -0.09
CLCN6-206ENST00000376496 MAP3K11Q16584 847 aa14.49□□□□□ -0.09
CLCN6-206ENST00000376496 CERKLQ49MI3 558 aaPredicted RBP14.49□□□□□ -0.09
CLCN6-206ENST00000376496 GRIPAP1Q4V328 841 aa14.49□□□□□ -0.09
CLCN6-206ENST00000376496 ADALQ6DHV7 355 aa14.49□□□□□ -0.09
CLCN6-206ENST00000376496 ENGASEQ8NFI3 743 aa14.49□□□□□ -0.09
CLCN6-206ENST00000376496 JDP2Q8WYK2 163 aa14.49□□□□□ -0.09
CLCN6-206ENST00000376496 MRPS27Q92552 414 aaKnown RBP14.49□□□□□ -0.09
CLCN6-206ENST00000376496 PSME4Q14997 1843 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms