RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.31□□□□□ -1.24
SMC1A-202ENST00000375340 PCDHB6Q9Y5E3 794 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 DLG5Q8TDM6 1919 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 CYP2D7A0A087X1C5 515 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 TBC1D10CQ8IV04 446 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 RASGRP4Q8TDF6 673 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 NOX5Q96PH1 765 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 KIF4AO95239 1232 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 TECP42680 631 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 TCIRG1Q13488 830 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 CFAP58Q5T655 872 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 NCAPH2Q6IBW4 605 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 VSTM4Q8IW00 320 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 LCORLQ8N3X6 602 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 SMARCC2Q8TAQ2 1214 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 PIH1D3Q9NQM4 214 aaKnown RBP7.31□□□□□ -1.24
SMC1A-202ENST00000375340 DIP2AQ14689 1571 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 CALCRLQ16602 461 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 FBXO18Q8NFZ0 1043 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 A0A1W2PRG0 241 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 LDHCP07864 332 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 GNAQP50148 359 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 SLC39A14Q15043 492 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 GIGYF2Q6Y7W6 1299 aaKnown RBP7.31□□□□□ -1.24
SMC1A-202ENST00000375340 TNKSO95271 1327 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 POTEJP0CG39 1038 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 ATP1A2P50993 1020 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 VAV2P52735 878 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 KMT5BQ4FZB7 885 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 HGSO14964 777 aaPredicted RBP7.31□□□□□ -1.24
SMC1A-202ENST00000375340 ZNF622Q969S3 477 aaKnown RBP eCLIP7.31□□□□□ -1.241e-7■■■□□ 17.5
SMC1A-202ENST00000375340 FERMT2Q96AC1 680 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 TAOK3Q9H2K8 898 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 PCDHA5Q9Y5H7 936 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 IFT172Q9UG01 1749 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 ZNF609O15014 1411 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 IGKV5-2P06315 115 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 EHMT1Q9H9B1 1298 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 TAF6LQ9Y6J9 622 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 TLDC2A0PJX2 215 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 PSDA5PKW4 1024 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 GNPATO15228 680 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 DYNLL1P63167 89 aaKnown RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 ZBTB38Q8NAP3 1195 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 FANCBQ8NB91 859 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 NLRP3Q96P20 1036 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 PPP6R2O75170 966 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 ETF1P62495 437 aaKnown RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 MRPS25P82663 173 aaKnown RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 DDB1Q16531 1140 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 WHAMMP3Q1A5X7 153 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 RESP18Q5W5W9 173 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 CCDC114Q96M63 670 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 APOA5Q6Q788 366 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 CCDC155Q8N6L0 562 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 RCOR1Q9UKL0 485 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 SAR1BQ9Y6B6 198 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 SOS2Q07890 1332 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 TNNC1P63316 161 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 IRX3P78415 501 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 USH1GQ495M9 461 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 TMOD2Q9NZR1 351 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 CIAO1O76071 339 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 UFL1O94874 794 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 HIBADHP31937 336 aaKnown RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 COPB1P53618 953 aaKnown RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 BRD3Q15059 726 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 ARID4AP29374 1257 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-202ENST00000375340 GNA11P29992 359 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 PTGDRQ13258 359 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 ARMCX5Q6P1M9 558 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 MAEAQ7L5Y9 396 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 GSTA5Q7RTV2 222 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 TEX11Q8IYF3 940 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 PARD6BQ9BYG5 372 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 KCNK9Q9NPC2 374 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 FAN1Q9Y2M0 1017 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 TMEM131LA2VDJ0 1609 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 E7EVH7 732 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 GNGT1P63211 74 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 STOX1Q6ZVD7 989 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 EPSTI1Q96J88 318 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 SLC39A2Q9NP94 309 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 NLRC4Q9NPP4 1024 aa7.3□□□□□ -1.24
SMC1A-202ENST00000375340 FOXN1O15353 648 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 MMP1P03956 469 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 CTNNA2P26232 953 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 MRRFQ96E11 262 aaKnown RBP7.29□□□□□ -1.24
SMC1A-202ENST00000375340 NGLY1Q96IV0 654 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 FAM204AQ9H8W3 233 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 SEC31BQ9NQW1 1179 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 PXDNLA1KZ92 1463 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 EEF2P13639 858 aaKnown RBP7.29□□□□□ -1.24
SMC1A-202ENST00000375340 ADD2P35612 726 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 SFMBT2Q5VUG0 894 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 CPLX4Q7Z7G2 160 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 GSPT2Q8IYD1 628 aaKnown RBP7.29□□□□□ -1.24
SMC1A-202ENST00000375340 PPP1R7Q15435 360 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 NYXQ9GZU5 481 aa7.29□□□□□ -1.24
SMC1A-202ENST00000375340 CCDC87Q9NVE4 849 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms