RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 GFPT2O94808 682 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 CLCN1P35523 988 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 MAPK9P45984 424 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 HYIQ5T013 277 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 KCNV1Q6PIU1 500 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 C1orf228Q6PIY5 440 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 ANKRD18AQ8IVF6 992 aa10.27□□□□□ -0.76
UBR4-201ENST00000375218 SERPINB3P29508 390 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 MUM1Q2TAK8 710 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 ZNF771Q7L3S4 317 aaPredicted RBP10.27□□□□□ -0.77
UBR4-201ENST00000375218 METTL3Q86U44 580 aaKnown RBP10.27□□□□□ -0.77
UBR4-201ENST00000375218 MYOCDQ8IZQ8 938 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.27□□□□□ -0.77
UBR4-201ENST00000375218 DDX12PQ92771 950 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 ZMAT2Q96NC0 199 aaKnown RBP10.27□□□□□ -0.77
UBR4-201ENST00000375218 THUMPD2Q9BTF0 503 aaKnown RBP10.27□□□□□ -0.77
UBR4-201ENST00000375218 CAPS2Q9BXY5 557 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 TSPY26PQ9H489 355 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
UBR4-201ENST00000375218 CKAP2LQ8IYA6 745 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 PPP1R14CQ8TAE6 165 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 MAP3K19Q56UN5 1328 aa10.27□□□□□ -0.77
UBR4-201ENST00000375218 TOR1BO14657 336 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 PGRP06401 933 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 TMOD1P28289 359 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 PKN2Q16513 984 aaKnown RBP10.26□□□□□ -0.77
UBR4-201ENST00000375218 RMDN2Q96LZ7 410 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 TEX13AQ9BXU3 409 aaPredicted RBP10.26□□□□□ -0.77
UBR4-201ENST00000375218 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 DCAF8L1A6NGE4 600 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 FOXO3O43524 673 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 HOXD10P28358 340 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 TCIRG1Q13488 830 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 EIF4A2Q14240 407 aaKnown RBP10.26□□□□□ -0.77
UBR4-201ENST00000375218 ARMC4Q5T2S8 1044 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.26□□□□□ -0.77
UBR4-201ENST00000375218 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 SERINC2Q96SA4 455 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 DESI2Q9BSY9 194 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 CEP72Q9P209 647 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 BLOC1S6Q9UL45 172 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 PARP4Q9UKK3 1724 aaKnown RBP10.26□□□□□ -0.77
UBR4-201ENST00000375218 ERBB4Q15303 1308 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
UBR4-201ENST00000375218 STK3Q13188 491 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 PDE1CQ14123 709 aaPredicted RBP10.26□□□□□ -0.77
UBR4-201ENST00000375218 C11orf91Q3C1V1 193 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 PNMA8AQ86V59 439 aaPredicted RBP10.26□□□□□ -0.77
UBR4-201ENST00000375218 CLIP2Q9UDT6 1046 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 FBXO10Q9UK96 956 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 ITGB4P16144 1822 aa10.26□□□□□ -0.77
UBR4-201ENST00000375218 ARPC4-TTLL3A0A0A6YYG9 625 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 ATF7P17544 494 aaPredicted RBP10.25□□□□□ -0.77
UBR4-201ENST00000375218 VARSP26640 1264 aaKnown RBP10.25□□□□□ -0.77
UBR4-201ENST00000375218 RSRC1Q96IZ7 334 aaKnown RBP10.25□□□□□ -0.77
UBR4-201ENST00000375218 BAG1Q99933 345 aaPredicted RBP10.25□□□□□ -0.77
UBR4-201ENST00000375218 MLLT1Q03111 559 aaPredicted RBP10.25□□□□□ -0.77
UBR4-201ENST00000375218 SEPT7Q16181 437 aaKnown RBP10.25□□□□□ -0.77
UBR4-201ENST00000375218 TCP11L2Q8N4U5 519 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 ARMC5Q96C12 935 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 ASB16Q96NS5 453 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 GMLQ99445 158 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 PLEKHA5Q9HAU0 1116 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 COL4A1P02462 1669 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 CCDC173Q0VFZ6 552 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 CCDC178Q5BJE1 867 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 EEPD1Q7L9B9 569 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 USP33Q8TEY7 942 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 DBNDD1Q9H9R9 158 aa10.25□□□□□ -0.77
UBR4-201ENST00000375218 TYW1Q9NV66 732 aaKnown RBP10.25□□□□□ -0.77
UBR4-201ENST00000375218 CGNL1Q0VF96 1302 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 VSTM5A8MXK1 200 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 AKAP10O43572 662 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 PSMA3P25788 255 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 MCL1Q07820 350 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 KRT24Q2M2I5 525 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 DDX42Q86XP3 938 aaKnown RBP eCLIP10.24□□□□□ -0.77
UBR4-201ENST00000375218 TSPYL6Q8N831 410 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 EXOC6Q8TAG9 804 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 SNTG2Q9NY99 539 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 ESPNB1AK53 854 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 BBOX1O75936 387 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 MAP2K2P36507 400 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 IRX1P78414 480 aaPredicted RBP10.24□□□□□ -0.77
UBR4-201ENST00000375218 NUGGCQ68CJ6 796 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 ENAHQ8N8S7 591 aaPredicted RBP10.24□□□□□ -0.77
UBR4-201ENST00000375218 LILRB1Q8NHL6 650 aaPredicted RBP10.24□□□□□ -0.77
UBR4-201ENST00000375218 PLCH1Q4KWH8 1693 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 MBD4O95243 580 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 FGRP09769 529 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 ST13P50502 369 aaKnown RBP10.24□□□□□ -0.77
UBR4-201ENST00000375218 RELTQ969Z4 430 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 ZBTB10Q96DT7 871 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 VEZTQ9HBM0 779 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 BRMS1Q9HCU9 246 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 NUP188Q5SRE5 1749 aa10.24□□□□□ -0.77
UBR4-201ENST00000375218 ZNF335Q9H4Z2 1342 aaPredicted RBP10.24□□□□□ -0.77
UBR4-201ENST00000375218 IFIT1P09914 478 aaKnown RBP10.23□□□□□ -0.77
UBR4-201ENST00000375218 MRE11P49959 708 aa10.23□□□□□ -0.77
UBR4-201ENST00000375218 DEUP1Q05D60 604 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms